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Q21TA1

- DCD_ALBFT

UniProt

Q21TA1 - DCD_ALBFT

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Protein
Deoxycytidine triphosphate deaminase
Gene
dcd, Rfer_3293
Organism
Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Rhodoferax ferrireducens)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

dCTP + H2O = dUTP + NH3.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. dCTP deaminase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. dUMP biosynthetic process Source: UniProtKB-UniPathway
  2. dUTP biosynthetic process Source: InterPro
  3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Nucleotide metabolism

Enzyme and pathway databases

BioCyciAFER338969:GHU9-3335-MONOMER.
UniPathwayiUPA00610; UER00665.

Names & Taxonomyi

Protein namesi
Recommended name:
Deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Short name:
dCTP deaminase
Gene namesi
Name:dcd
Ordered Locus Names:Rfer_3293
OrganismiAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Rhodoferax ferrireducens)
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
ProteomesiUP000008332: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 189189Deoxycytidine triphosphate deaminaseUniRule annotation
PRO_1000009796Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_3293.

Structurei

3D structure databases

ProteinModelPortaliQ21TA1.

Family & Domainsi

Sequence similaritiesi

Belongs to the dCTP deaminase family.

Phylogenomic databases

eggNOGiCOG0717.
HOGENOMiHOG000228600.
KOiK01494.
OMAiEFEGHIT.
OrthoDBiEOG67DPKR.

Family and domain databases

Gene3Di2.70.40.10. 1 hit.
HAMAPiMF_00146. dCTP_deaminase.
InterProiIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view]
PfamiPF00692. dUTPase. 1 hit.
[Graphical view]
SUPFAMiSSF51283. SSF51283. 1 hit.
TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

Sequencei

Sequence statusi: Complete.

Q21TA1-1 [UniParc]FASTAAdd to Basket

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MTIKSDKWIR RMAQQHGMIE PFEPGQIRQD ANGNKIVSYG TSSYGYDIRC    50
APEFKVFTNI HSTVVDPKNF DEKSFVDFHG DSCIIPPNSF ALARTMEYFR 100
IPRNVLTICL GKSTYARCGI IVNVTPFEPE WEGYVTLEFS NTTPLPAKIY 150
AGEGCAQVLF FESDEECETS YKDRGGKYQG QVGVTLPRA 189
Length:189
Mass (Da):21,334
Last modified:April 18, 2006 - v1
Checksum:iC14DA105B2E0CB42
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000267 Genomic DNA. Translation: ABD71002.1.
RefSeqiWP_011465565.1. NC_007908.1.
YP_524533.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaiABD71002; ABD71002; Rfer_3293.
GeneIDi3962878.
KEGGirfr:Rfer_3293.
PATRICi23239351. VBIRhoFer131161_3669.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000267 Genomic DNA. Translation: ABD71002.1 .
RefSeqi WP_011465565.1. NC_007908.1.
YP_524533.1. NC_007908.1.

3D structure databases

ProteinModelPortali Q21TA1.
ModBasei Search...

Protein-protein interaction databases

STRINGi 338969.Rfer_3293.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD71002 ; ABD71002 ; Rfer_3293 .
GeneIDi 3962878.
KEGGi rfr:Rfer_3293.
PATRICi 23239351. VBIRhoFer131161_3669.

Phylogenomic databases

eggNOGi COG0717.
HOGENOMi HOG000228600.
KOi K01494.
OMAi EFEGHIT.
OrthoDBi EOG67DPKR.

Enzyme and pathway databases

UniPathwayi UPA00610 ; UER00665 .
BioCyci AFER338969:GHU9-3335-MONOMER.

Family and domain databases

Gene3Di 2.70.40.10. 1 hit.
HAMAPi MF_00146. dCTP_deaminase.
InterProi IPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view ]
Pfami PF00692. dUTPase. 1 hit.
[Graphical view ]
SUPFAMi SSF51283. SSF51283. 1 hit.
TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M.
    , Kyrpides N., Ivanova N., Richardson P.
    Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-621 / DSM 15236 / T118.

Entry informationi

Entry nameiDCD_ALBFT
AccessioniPrimary (citable) accession number: Q21TA1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 18, 2006
Last modified: September 3, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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