Q21T91 (Q21T91_RHOFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ABD71012.1
EC=3.5.1.28 EMBL ABD71012.1

Gene names

Ordered Locus Names:

Rfer_3303

Organism

Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP]

Taxonomic identifier

338969 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Albidiferax

Protein attributes

Sequence length	474 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABD71012.1
Molecular function	Hydrolase EMBL ABD71012.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 25	25	Potential EMBL ABD71012.1
	Chain	26 – 474	449	Potential EMBL ABD71012.1		PRO_5000110677

Sequences

	Sequence		Length	Mass (Da)
	Q21T91 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: AF4C49329080429C	FASTA	474	50,723
	10 20 30 40 50 60 MKRRDLLQSG ALVLLLGAQH LARGATILAV RVWPAPDYSR VTIESDTALK VKQFFIANPP 70 80 90 100 110 120 RLAVDIEGIE LNPALKELVA KVRSDDPNIA GIRAGQNAPG TVRLVLDLKQ PIAPQVFTLT 130 140 150 160 170 180 PVAAYQHRLV FDLYPTQVSD PLEALIADRI KDQARASPGP ATPVTGDPLG ELIAQHTQRP 190 200 210 220 230 240 PLKLGGPDSV LNTANAKITS NSVANSDQST GAKGQKGINI FGTDNAPVQS PAVTDRLIII 250 260 270 280 290 300 ALDPGHGGED PGAIGPGGTR EKDVVLRLAH RLRDRINATV IKGNTMRAYL TRDADFFVPL 310 320 330 340 350 360 HVRVQKARQV QADLFVSLHA DAFFTPHPQG ASVFALSQGG ASSSAARWMA AKENKADLIG 370 380 390 400 410 420 GLNVKARDAQ VTRALFDMST TAQINDSLKL GSAMLGEIGR VGKLHKGRVE QASFAVLKAP 430 440 450 460 470 DIPSVLVEAA FISNPEEEIK LNSEAYQEQL ASALMRGIEG YFSKNPPLAR NRSV

References

[1]

"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. , Kyrpides N., Ivanova N., Richardson P. Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000267 Genomic DNA. Translation: ABD71012.1.
RefSeq	YP_524543.1. NC_007908.1.
3D structure databases
ProteinModelPortal	Q21T91.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21T91.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3962888.
GenomeReviews	Gene locus Rfer_3303 in contig CP000267_GR.
KEGG	rfr:Rfer_3303.
NMPDR	fig|338969.3.peg.1764.
PATRIC	23239371. VBIRhoFer131161_3679.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0860.
HOGENOM	HBG656726.
OMA	VWPAEDY.
PhylomeDB	Q21T91.
Enzyme and pathway databases
BioCyc	RFER338969:RFER_3303-MONOMER.
Family and domain databases
InterPro	IPR021731. AMIN. IPR002508. CW_Hdrlase/autolysin_cat. [Graphical view]
Gene3D	G3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KO	K01448.
Pfam	PF01520. Amidase_3. 1 hit. PF11741. AMIN. 1 hit. [Graphical view]
SMART	SM00646. Ami_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q21T91_RHOFD

Accession

Primary (citable) accession number: Q21T91

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)