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Q21SU6 (Q21SU6_ALBFT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_3449 EMBL ABD71157.1
OrganismAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Rhodoferax ferrireducens) [Complete proteome] [HAMAP] EMBL ABD71157.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax

Protein attributes

Sequence length632 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD71157.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3333 Potential EMBL ABD71157.1
Chain34 – 632599 Potential EMBL ABD71157.1
PRO_5000110709

Sequences

Sequence LengthMass (Da)Tools
Q21SU6 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 2F842EECFEFD1ADA

FASTA63266,894
        10         20         30         40         50         60 
MFASIRSRLI GISVLVVILA VVTATLVSYS LARGFLLEDI AANLAQTAKA EGKRIGLWAK 

        70         80         90        100        110        120 
MQKDIVTSMA TQANAVDPNV GLQQAIDAGK LDLAYVGHAD KRMISVPSRN RPADYDPTAR 

       130        140        150        160        170        180 
PWYKLADSQG KAVLTAPYIG ASSKKLVVSF AYPVKEGSNT VAVVATDVAL EDVLKDLQQI 

       190        200        210        220        230        240 
KPTASGFAFI VDKDGKIIAH PRAELTLKPL AELSKDLTPD VISRALKEGA EPPRAQIDGN 

       250        260        270        280        290        300 
GFLLKGTPVP ETDWTLVTAA SESEALARLN QLLTYAALTI VAVGIAAALL SMGVVNHLLG 

       310        320        330        340        350        360 
GLVRIRDAMR EIGSGSGDLT QRLPVQGRDE ISEMAQAFNE FVQKTEQVMR DVRSSSASIA 

       370        380        390        400        410        420 
NASREVAAGS LDLSNRTEQT ASSLEETAAS MQELTETVRH SADSANMANQ LAGSASQIAH 

       430        440        450        460        470        480 
RGGEVVSQVV STMNDISTSS ARISDIIQVI DGIAFQTNIL ALNAAVEAAR AGEQGRGFAV 

       490        500        510        520        530        540 
VASEVRSLAG RSAEAAKEIK SLIVNSVERV EAGISLVAAA GQTMNEIVQS IGKVSEIVGD 

       550        560        570        580        590        600 
ISSQTSDQRH GIDEINAAIR QLDQMTQQNA ALVEESTAAA DSMSDQAQRL AQVVAAFKLS 

       610        620        630 
DTQNTPMSRP FRTEPVRIKA PSVLEHCGPL QL 

« Hide

References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-621 / DSM 15236 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD71157.1.
RefSeqYP_524688.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21SU6.
SMRQ21SU6. Positions 376-599.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_3449.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD71157; ABD71157; Rfer_3449.
GeneID3962556.
KEGGrfr:Rfer_3449.
PATRIC23239687. VBIRhoFer131161_3838.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAMHAIANG.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycAFER338969:GHU9-3491-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21SU6_ALBFT
AccessionPrimary (citable) accession number: Q21SU6
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: June 11, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)