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Q21SG8 (Q21SG8_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Rfer_3581
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP]
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Albidiferax

Protein attributes

Sequence length752 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3531Proton acceptor By similarity HAMAP MF_00641
Active site6551Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
Q21SG8 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 214F99202B452293

FASTA75281,386
        10         20         30         40         50         60 
MTERTTRHRL QIATVLQQFI DTQVLPGTGV APAKFWKGVD AIVADLAPKN IALLAERERL 

        70         80         90        100        110        120 
QTELDSWHAA HPGPINMSDT AAPNSMSAYR AFLEQIGYLV PAPKKARITT TQVDAELAIQ 

       130        140        150        160        170        180 
AGPQLVVPIL NARYALNAAN SRWGSLYDAL YGTDVIDEAK GCEKVGKKGG YNPKRGAKVI 

       190        200        210        220        230        240 
AYARHVLDRT APLRKGSHVD SVGYRIKDGK LAVKLLDGSN TSLQTPAQLV GYQGDAKAPS 

       250        260        270        280        290        300 
SVLLQHNGLH LDIIINRSTP IGASDPAGVC DLVLEAALST ILDLEDSIAA VDADDKVLAY 

       310        320        330        340        350        360 
SNWLGILQGT LTESVTKGSK TFTRGLNADR LYTPPAGKGK PVVLHGRSLM FVRNVGHLMT 

       370        380        390        400        410        420 
NPAILYTDKA GVTREIPEGI LDAVVTTTIA MHDLKRTAKD GIRNSRKGSV YIVKPKMHGP 

       430        440        450        460        470        480 
VEVAFANELF GRVEKMLGLR DSTVKLGIMD EERRTSVNLK ACIGAAASRV AFINTGFLDR 

       490        500        510        520        530        540 
TGDEMHSAMQ GGAMIRKGDM KTSAWIQAYE RNNVLVGLAC GLRGKAQIGK GMWAMPDLMK 

       550        560        570        580        590        600 
DMLKQKIAHP LAGANTAWVP SPTGATLHAL HYHQVLVSEV QKEMEKINAD KQRDNLLTGL 

       610        620        630        640        650        660 
LQVPVAASKN WSAAEIQQEL DNNAQGILGY VVRWIDQGVG CSKVPDIHNV ALMEDRATLR 

       670        680        690        700        710        720 
ISSQHMANWL HHGVASAAQI KETFERMAAV VDQQNAGDPL YKNMAGHFDT SMAYMAACDL 

       730        740        750 
VFKGLSQPSG YTEPLLHGWR LKVKAAAKAV AV

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References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000267 Genomic DNA. Translation: ABD71285.1.
RefSeqYP_524816.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21SG8.
SMRQ21SG8. Positions 3-746.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ21SG8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3961426.
GenomeReviewsGene locus Rfer_3581 in contig CP000267_GR.
KEGGrfr:Rfer_3581.
NMPDRfig|338969.3.peg.3025.
PATRIC23239953. VBIRhoFer131161_3971.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHBG350005.
OMAENANWSV.
PhylomeDBQ21SG8.
ProtClustDBPRK02999.

Enzyme and pathway databases

BioCycRFER338969:RFER_3581-MONOMER.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ21SG8_RHOFD
AccessionPrimary (citable) accession number: Q21SG8
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: December 14, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info