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Q21SE0 (Q21SE0_ALBFT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_3610 EMBL ABD71313.1
OrganismAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Rhodoferax ferrireducens) [Complete proteome] [HAMAP] EMBL ABD71313.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD71313.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2828 Potential EMBL ABD71313.1
Chain29 – 511483 Potential EMBL ABD71313.1
PRO_5000110741

Sequences

Sequence LengthMass (Da)Tools
Q21SE0 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: A3A220B626D69B6C

FASTA51153,489
        10         20         30         40         50         60 
MKISSRLTLG FGVLGLLIAL MGGVSLLKVG VMSKMFNQVI DERMPLIAAT NEVKGDLNAI 

        70         80         90        100        110        120 
SIALRNTMMM RDADGIKKEV ERVESARVRI NASLARLGEQ TTSDTGQAIL AKVAKARSQY 

       130        140        150        160        170        180 
DPMQAEVMGL VNAGSFFEAR TLLMDKVAPA QEAYFDTLNG LLTHLDSQLN QSTSATQDAA 

       190        200        210        220        230        240 
TSMKVVVVAT LAIALVLAVL MAAWIIRSIT GPLNQAVAVS RAVAAGDLSQ QFEASGKSET 

       250        260        270        280        290        300 
ALLLLALKDM QAHLSTVVSE VRDDAESVAT ASAEIAQGDL DLSARTESQA SSLEQTSASM 

       310        320        330        340        350        360 
ELLSANVKQN ADNARKANEL ALNASSVAAR GGDVVSQVVD TMKGINDASR RISDIISVID 

       370        380        390        400        410        420 
GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRSLAGR SAEAAREIKS LINASVERVE 

       430        440        450        460        470        480 
QGSALVDRAG ATMSEVVNSI RHVTDIMAEI SIASTDQSDG VSQVGEAIAQ MDQATQQNAA 

       490        500        510 
LVEEMAASAG SLKSRAQALV QTVAVFKLEA A 

« Hide

References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-621 / DSM 15236 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD71313.1.
RefSeqYP_524844.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21SE0.
SMRQ21SE0. Positions 285-509.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_3610.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD71313; ABD71313; Rfer_3610.
GeneID3962625.
KEGGrfr:Rfer_3610.
PATRIC23240025. VBIRhoFer131161_4002.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAMRIANMK.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycAFER338969:GHU9-3658-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21SE0_ALBFT
AccessionPrimary (citable) accession number: Q21SE0
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)