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Q21N92 (Q21N92_SACD2) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length566 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q21N92 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: F1232359422CB09C

FASTA56664,568
        10         20         30         40         50         60 
MYRYVLGVKP SFLLFWLLMA APSFAAKPDG KQKAIDPFWN NAIVYFLLTD RFANGDTSND 

        70         80         90        100        110        120 
RNFDRAQDGA VLRNFMGGDI KGITQKIRSG YFTALGVEVL WMTPVVEQIH GYWDEDWGRS 

       130        140        150        160        170        180 
YPFHGYWPKD WTSVDPNFGT ETDLKEMIAT AHAYGIRVLA DVIINHTGLK TKVDVAWPQD 

       190        200        210        220        230        240 
WIRTEPTCEW HSYIHNVTCA LAPSLTDVRT ESNKPVALPE FLLEKWRNEG REKQELAELD 

       250        260        270        280        290        300 
AFFERTNLPR APQNYIVKWL TDWVREYGID GFRVDTAKHV EAEIWQVLKV EASTAFNEWK 

       310        320        330        340        350        360 
AKNPNALPDE KDFFMIGEVM HFGVNGFKNT PAGTRNYDYG DKQVDFFNYG FDSLINMGFA 

       370        380        390        400        410        420 
THASDSMETI FSTYSKELHQ GPLQGVGILN YVVSHDDPEP HDKEHTKPYE TALKLMLAPG 

       430        440        450        460        470        480 
AVQIYYGDEL ARNLIVEGAV GDATWRSFMN WQDIATVETQ LLLQHWQKLG TFRKHHMAVG 

       490        500        510        520        530        540 
AGIHKIRSNK PYIFSRVLHD ATHADKVLVG IELNKGEKVL PTYSIFNNGD VVKDYYSNTL 

       550        560 
VTVEGGKVVL NTPYEIVLLG EYHAIN 

« Hide

References

[1]"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T."
Weiner R.M., Taylor L.E.II., Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S.
PLoS Genet. 4:E1000087-E1000087(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2-40 / ATCC 43961 / DSM 17024.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000282 Genomic DNA. Translation: ABD79837.1.
RefSeqYP_526049.1. NC_007912.1.

3D structure databases

ProteinModelPortalQ21N92.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203122.Sde_0573.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD79837; ABD79837; Sde_0573.
GeneID3964864.
KEGGsde:Sde_0573.
PATRIC23399853. VBISacDeg56404_0631.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000273912.
KOK01176.
OMAALINFDM.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycSDEG203122:GI2M-577-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameQ21N92_SACD2
AccessionPrimary (citable) accession number: Q21N92
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: July 9, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)