Q21MD4 (Q21MD4_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
10 kDa chaperonin HAMAP MF_00580

Alternative name(s):
GroES protein HAMAP MF_00580
Protein Cpn10 HAMAP MF_00580

Gene names

Name:	groS HAMAP MF_00580
Synonyms:	groES HAMAP MF_00580
Ordered Locus Names:	Sde_0883

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD80145.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus

Protein attributes

Sequence length	96 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter By similarity. HAMAP MF_00580
Subunit structure	Heptamer of 7 subunits arranged in a ring By similarity. HAMAP MF_00580
Subcellular location	Cytoplasm By similarity HAMAP MF_00580.
Sequence similarities	Belongs to the GroES chaperonin family. HAMAP MF_00580

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP MF_00580
Molecular function	Chaperone HAMAP MF_00580
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein folding Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21MD4 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: D1687F8F34AC90CA	FASTA	96	10,255
	10 20 30 40 50 60 MKIRPLHDRV VVRRKEEEAT TASGIVLPGS AKEKPNQGEV IAIGSGRVLD SGDVRPLDVK 70 80 90 VGDVVVFGKY AGSDTIEVDG EELVILSESD IKAIVE

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed: 18516288] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD80145.1.
RefSeq	YP_526357.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21MD4.
SMR	Q21MD4. Positions 3-96.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21MD4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3968817.
GenomeReviews	Gene locus Sde_0883 in contig CP000282_GR.
KEGG	sde:Sde_0883.
NMPDR	fig|203122.1.peg.497.
PATRIC	23400529. VBISacDeg56404_0968.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0234.
HOGENOM	HBG703377.
OMA	YGVKVEK.
PhylomeDB	Q21MD4.
ProtClustDB	CLSK2528479.
Enzyme and pathway databases
BioCyc	SDEG203122:SDE_0883-MONOMER.
Family and domain databases
HAMAP	MF_00580. CH10. [Tree]
InterPro	IPR020818. Chaperonin_Cpn10. IPR018369. Chaprnonin_Cpn10_CS. IPR011032. GroES-like. [Graphical view]
Gene3D	G3DSA:2.30.33.40. Chaprnin_Cpn10. 1 hit.
KO	K04078.
PANTHER	PTHR10772. Chaprnin_Cpn10. 1 hit.
Pfam	PF00166. Cpn10. 1 hit. [Graphical view]
PRINTS	PR00297. CHAPERONIN10.
SMART	SM00883. Cpn10. 1 hit. [Graphical view]
SUPFAM	SSF50129. GroES_like. 1 hit.
PROSITE	PS00681. CHAPERONINS_CPN10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q21MD4_SACD2

Accession

Primary (citable) accession number: Q21MD4

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)