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Q21LQ5 (Q21LQ5_SACD2) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sde_1112 EMBL ABD80374.1
OrganismSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD80374.1
Taxonomic identifier203122 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeSaccharophagus

Protein attributes

Sequence length399 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q21LQ5 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 92CDC5C67B27C3F6

FASTA39944,898
        10         20         30         40         50         60 
MSQSGRRLLV IDDDTIVRQS IAAYLEDSGF LVHQEADGHS ALTWLMDNPP CLVLTDLRMP 

        70         80         90        100        110        120 
GTDGLTLLKA IREWDVELPV IVISGAGAVH DVAEALRHGA SDYLVKPIVD MEVLVHSIRR 

       130        140        150        160        170        180 
ALERHELIIE NRQYRLELEK ANKELKEYIR VLERDQLAGR RVQSKLLPPP AVSFGGINVD 

       190        200        210        220        230        240 
YKIIPSLYLS GDFVDYGFLS NRYLAFYLTD VSGHGAASAF VTVWLKQIVR RFFREQEIFN 

       250        260        270        280        290        300 
TKDSFERDTA SLLKLINKEV IRSKVGAHMT CFVGVIDTHT HEMRYVVAGH LPLPLLIANG 

       310        320        330        340        350        360 
RAEYLEGKGK PLGIFEDAEW EVQSIQLPLQ QQFSLVVFSD GVLEVLPPDN LIEKENYLRN 

       370        380        390 
ILSKQQGSIE DICAALQINS LDAAPDDIAV LKIDNEMLK 

« Hide

References

[1]"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T."
Weiner R.M., Taylor L.E.II., Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S.
PLoS Genet. 4:E1000087-E1000087(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2-40 / ATCC 43961 / DSM 17024.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000282 Genomic DNA. Translation: ABD80374.1.
RefSeqYP_526586.1. NC_007912.1.

3D structure databases

ProteinModelPortalQ21LQ5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203122.Sde_1112.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD80374; ABD80374; Sde_1112.
GeneID3968299.
KEGGsde:Sde_1112.
PATRIC23401051. VBISacDeg56404_1220.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2204.
HOGENOMHOG000225792.
OMANLLQEDQ.
OrthoDBEOG69GZGV.
ProtClustDBCLSK867524.

Enzyme and pathway databases

BioCycSDEG203122:GI2M-1127-MONOMER.

Family and domain databases

InterProIPR011006. CheY-like_superfamily.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21LQ5_SACD2
AccessionPrimary (citable) accession number: Q21LQ5
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)