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Q21LJ4 (Q21LJ4_SACD2) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sde_1173 EMBL ABD80435.1
OrganismSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD80435.1
Taxonomic identifier203122 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeSaccharophagus

Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q21LJ4 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 79C7A0FB918C5A7F

FASTA46051,897
        10         20         30         40         50         60 
MSDSKQADPN IEYSLRQNDI RALICCAAAG TLLVNVSWSS LFVIESLVAM SVLSYALGSY 

        70         80         90        100        110        120 
LWLKQISHGP RAATLFDRVM TMDAAVIGLV VSFSGFNILP TILFITMIQF NSLINGGVKK 

       130        140        150        160        170        180 
WAIDNVAFFV GVGFTFLIRE PQLVFSDKLE ISAVSLIGIF TYFCAYALYA HNRIHKLELS 

       190        200        210        220        230        240 
NKKLVNEQTL YKLRTYKLAR YLTPTVWKAV NEGREKDLST ERKRVTVFFS DIMGFSALSE 

       250        260        270        280        290        300 
ELEAETLTDI LNTYLTEMTK IATKHKGTID KFMGDGVMIV FGDNESAGVK TDCLRCVAMS 

       310        320        330        340        350        360 
IEMRRKMKEL QTKWYNQGIK KPLQIRMGIN TGYCTVGSFG TNHYMDYTVL GTHVNLASRL 

       370        380        390        400        410        420 
ESAASPGEIL VSHETWALIK DVVMCRDKGE ISAKGFSHAI KVYEVADFRK DLGKQQSYFE 

       430        440        450        460 
HNSEGFSMHL DLDKIRNYDK DKVITYLERA ADKLRDKIIS 

« Hide

References

[1]"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T."
Weiner R.M., Taylor L.E.II., Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S.
PLoS Genet. 4:E1000087-E1000087(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2-40 / ATCC 43961 / DSM 17024.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000282 Genomic DNA. Translation: ABD80435.1.
RefSeqYP_526647.1. NC_007912.1.

3D structure databases

ProteinModelPortalQ21LJ4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203122.Sde_1173.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD80435; ABD80435; Sde_1173.
GeneID3968438.
KEGGsde:Sde_1173.
PATRIC23401185. VBISacDeg56404_1285.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2114.
HOGENOMHOG000225757.
OMARASICCI.
OrthoDBEOG690M9K.
ProtClustDBCLSK867825.

Enzyme and pathway databases

BioCycSDEG203122:GI2M-1190-MONOMER.

Family and domain databases

Gene3D3.30.70.1230. 1 hit.
InterProIPR001054. A/G_cyclase.
[Graphical view]
PfamPF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTSM00044. CYCc. 1 hit.
[Graphical view]
SUPFAMSSF55073. SSF55073. 1 hit.
PROSITEPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21LJ4_SACD2
AccessionPrimary (citable) accession number: Q21LJ4
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: April 16, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)