Q21LJ2 (Q21LJ2_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
B-agarase EMBL ABD80437.1
EC=3.2.1.81 EMBL ABD80437.1

Gene names

Name:	aga16B EMBL ABD80437.1
Ordered Locus Names:	Sde_1175

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD80437.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus

Protein attributes

Sequence length	598 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABD80437.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21LJ2 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: F689D11B63D59362	FASTA	598	64,450
	10 20 30 40 50 60 MKTTKCALAA LFFSTPLMAA DWDGIPVPAD PGNGNTWELQ SLSDDFNYAA PANGKSTTFY 70 80 90 100 110 120 SRWSEGFINA WLGPGQTEFY GPNASVEGGH LIIKATRKPG TTQIYTGAIH SNESFTYPLY 130 140 150 160 170 180 LEARTKITNL TLANAFWLLS SDSTEEIDVL ESYGSDRATE TWFDERLHLS HHVFIRQPFQ 190 200 210 220 230 240 DYQPKDAGSW YPNPDGGTWR DQFFRIGVYW IDPWTLEYYV NGELVRTVSG PEMIDPYGYT 250 260 270 280 290 300 NGTGLSKPMQ VIFDAEHQPW RDEQGTAPPT DAELADSSRN QFLIDWVRFY KPVASNNGGG 310 320 330 340 350 360 DPGNGGTPGN GGSGDTVVVE MANFSATGKE GSAVAGDTFT GFNPSGANNI NYNTLGDWAD 370 380 390 400 410 420 YTVNFPAAGN YTVNLIAASP VTSGLGADIL VDSSYAGTIP VSSTGAWEIY NTFSLPSSIY 430 440 450 460 470 480 IASAGNHTIR VQSSGGSAWQ WNGDELRFTQ TDADTGTNPP STASIAVEAE NFNAVGGTFS 490 500 510 520 530 540 DGQAQPVSVY TVNGNTAINY VNQGDYADYT IAVAQAGNYT ISYQAGSGVT GGSIEFLVNE 550 560 570 580 590 NGSWASKTVT AVPNQGWDNF QPLNGGSVYL SAGTHQVRLH GAGSNNWQWN LDKFTLSN

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed: 18516288] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD80437.1.
RefSeq	YP_526649.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21LJ2.
SMR	Q21LJ2. Positions 461-598.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21LJ2.
Protein family/group databases
CAZy	CBM6. Carbohydrate-Binding Module Family 6. GH16. Glycoside Hydrolase Family 16.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3968614.
GenomeReviews	Gene locus Sde_1175 in contig CP000282_GR.
KEGG	sde:Sde_1175.
NMPDR	fig|203122.1.peg.3201.
PATRIC	23401191. VBISacDeg56404_1287.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG76932.
ProtClustDB	CLSK507171.
Enzyme and pathway databases
BioCyc	SDEG203122:SDE_1175-MONOMER.
Family and domain databases
InterPro	IPR006584. Cellulose-bd_IV. IPR005084. CMB_fam6. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR008979. Galactose-bd-like. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
KO	K01219.
Pfam	PF03422. CBM_6. 2 hits. [Graphical view]
SMART	SM00606. CBD_IV. 2 hits. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF49785. Gal_bind_like. 2 hits.
PROSITE	PS51175. CBM6. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q21LJ2_SACD2

Accession

Primary (citable) accession number: Q21LJ2

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)