Q21JV2 (Q21JV2_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative a-L-arabinofuranosidase EMBL ABD81027.1

Gene names

Name:	arb51A EMBL ABD81027.1
Ordered Locus Names:	Sde_1767

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD81027.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus

Protein attributes

Sequence length	534 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21JV2 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 3E1B41D39522B55D	FASTA	534	59,355
	10 20 30 40 50 60 MNPASTLSVK TTNKTTNHLK KVALTVAAIV APLTSWADVK VSLNPQNTGE TISKYIYGQF 70 80 90 100 110 120 AEHLGSGIYG GIWVGEDSPI PNKNGFRNDV IKALQELQVP VIRWPGGCFA DEYRWRDGIG 130 140 150 160 170 180 PREQRPIRVN THWGGVEEPN TFGTHEFFEL VELLNTEAYV AGNLGTGSPQ EMAEWLEYIV 190 200 210 220 230 240 SNSNSTVVAE RKKNGREEPW EVAFWGVGNE SWGCGGNLTP EYYTNLYRHF STFVKATGAK 250 260 270 280 290 300 RPKLVASGSY DDDETWTTPL SKLKNNIDGI SHHYYTLPTS DWSIKGAATG FDEKEWILTL 310 320 330 340 350 360 ERTLKIDSYL ATQTGILKKN NPEGNIGLYL DEWGTWYDAE PGTNPGFLYQ QNTVRDAIVA 370 380 390 400 410 420 AVNLNIFHNY ADRLHMANIA QMVNVLQAMI LTDNEKMLLT PTYHVFKMYI PFQDATHIPL 430 440 450 460 470 480 DIKGQRDYSA HKTTVPGFSA SAAKTPNGNI VVSLVNLNPN EAEEVSIALQ GIKVKTITGE 490 500 510 520 530 LLTSQKMDAH NTFDKPNNVQ PRALNQSDYS ISKNGKTLTV KLPAKAVVVL QLNK

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed: 18516288] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD81027.1.
RefSeq	YP_527239.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21JV2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21JV2.
Protein family/group databases
CAZy	GH51. Glycoside Hydrolase Family 51.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3966673.
GenomeReviews	Gene locus Sde_1767 in contig CP000282_GR.
KEGG	sde:Sde_1767.
NMPDR	fig|203122.1.peg.4181.
PATRIC	23402487. VBISacDeg56404_1924.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3534.
HOGENOM	HBG654651.
OMA	GRTEPWK.
Enzyme and pathway databases
BioCyc	SDEG203122:SDE_1767-MONOMER.
Family and domain databases
InterPro	IPR010720. Alpha-L-AF_C. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01209.
Pfam	PF06964. Alpha-L-AF_C. 1 hit. [Graphical view]
SMART	SM00813. Alpha-L-AF_C. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q21JV2_SACD2

Accession

Primary (citable) accession number: Q21JV2

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)