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Q21IP0 (Q21IP0_SACD2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sde_2179 EMBL ABD81439.1
OrganismSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD81439.1
Taxonomic identifier203122 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeSaccharophagus

Protein attributes

Sequence length575 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q21IP0 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: AF7127B5B094C2C5

FASTA57564,121
        10         20         30         40         50         60 
MDVEQHALKV LIAEDSAPDR LILATIVSNA GHIAIPVTDG VEAVTAFKAE RPDIILMDVL 

        70         80         90        100        110        120 
MPNMGGVEAA KKIREIARDE LVPILFLTSL SDTDSLVECL EAGGDDFVSK PYNRVVLQSK 

       130        140        150        160        170        180 
IKAFGRMREM HTTVAKQRDE IERHHNHLIQ EQRVAKQVFD KIAHSGCLDL SNIRYSMSPL 

       190        200        210        220        230        240 
AVFNGDVLVA EVSPSGNMII LLGDFTGHGL PAAVGSIPLA TTFYGMVRKG FALPDILREI 

       250        260        270        280        290        300 
NHKLHEILPV GFFCCATCIE LNFAEQTMFT WTGGLPPSYL YRYKTDSYDI INSSNLPLGV 

       310        320        330        340        350        360 
LASSTFKAEP TRIELDIGDR LYMWSDGVFE SRNAEGDMFG EDRLHDLMQE LRGKNTLFDT 

       370        380        390        400        410        420 
ILGRVHQHIG ANDKDDDISL VEIIIQNIEV VPENTDAILS QSGMQDWSMD LTLSESSLKE 

       430        440        450        460        470        480 
FDPLPLLINI VTQVPGLQKN STFLYTMLAE LYANALEHGV LALKSADKHD PRGFTQFYQE 

       490        500        510        520        530        540 
RKERLAALEH GSVKFEFKHE ASEDGGLLIV VVKDSGEGFD VEAREQRKRE EAKTRDSKTV 

       550        560        570 
YHGRGLTLLS SISEKLIIHP PGNHIEVHFR WKATV 

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References

[1]"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T."
Weiner R.M., Taylor L.E.II., Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S.
PLoS Genet. 4:E1000087-E1000087(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2-40 / ATCC 43961 / DSM 17024.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000282 Genomic DNA. Translation: ABD81439.1.
RefSeqYP_527651.1. NC_007912.1.

3D structure databases

ProteinModelPortalQ21IP0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203122.Sde_2179.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD81439; ABD81439; Sde_2179.
GeneID3967563.
KEGGsde:Sde_2179.
PATRIC23403350. VBISacDeg56404_2348.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
HOGENOMHOG000007972.
OMAQSPYALF.
OrthoDBEOG69GZGV.

Enzyme and pathway databases

BioCycSDEG203122:GI2M-2216-MONOMER.

Family and domain databases

Gene3D3.30.565.10. 1 hit.
InterProIPR011006. CheY-like_superfamily.
IPR003594. HATPase_ATP-bd.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF13581. HATPase_c_2. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00387. HATPase_c. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF55874. SSF55874. 2 hits.
SSF81606. SSF81606. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21IP0_SACD2
AccessionPrimary (citable) accession number: Q21IP0
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)