Q21HD6 (Q21HD6_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative xylanase EMBL ABD81893.1

Gene names

Name:	xyn10C EMBL ABD81893.1
Ordered Locus Names:	Sde_2633

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD81893.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus

Protein attributes

Sequence length	374 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL ABD81893.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21HD6 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: BB0FE44E9D4E6FE1	FASTA	374	42,381
	10 20 30 40 50 60 MNCTRRNIVK AGLLGSAFVA LPAVARALPG LATKFRDQFY VGTAVSARSL NTPSGAFAAT 70 80 90 100 110 120 VAHQFNALTA ENAMKPALLQ PQMGEWRWQD ADAIVRFAEQ HQMLMHGHTL VWHSQTPDWF 130 140 150 160 170 180 FQNKQGEPAD KATLYRRQEE YINAVVGRYK GRVHSWDVVN EAEDEGKGWR KSHWYNICGP 190 200 210 220 230 240 EFMERAFRLA HAADPKAHLC YNDYNMHLPQ KREFLVKLFK DYIKRGVPIH GVGLQGHVGL 250 260 270 280 290 300 DYPSLDELEK TIVAMADLGL KVHITELDVD VLPAPWQLAS ADISTKFEYD KSLNPYVDGL 310 320 330 340 350 360 PDAVNQQLSA RYVELFKLFI KHQQHIGRVT FWGVGDGDSW KNNFPVPGRT NYPLLFDRNL 370 KPKPAYNALV ALKL

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed: 18516288] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD81893.1.
RefSeq	YP_528105.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21HD6.
SMR	Q21HD6. Positions 30-373.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21HD6.
Protein family/group databases
CAZy	GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3968530.
GenomeReviews	Gene locus Sde_2633 in contig CP000282_GR.
KEGG	sde:Sde_2633.
NMPDR	fig|203122.1.peg.776.
PATRIC	23404342. VBISacDeg56404_2836.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3693.
HOGENOM	HBG626574.
OMA	FRILHET.
ProtClustDB	CLSK2313194.
Enzyme and pathway databases
BioCyc	SDEG203122:SDE_2633-MONOMER.
Family and domain databases
InterPro	IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR006311. TAT_signal. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. PS51318. TAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q21HD6_SACD2

Accession

Primary (citable) accession number: Q21HD6

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)