Q21HC5 (Q21HC5_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
B-agarase EMBL ABD81904.1
EC=3.2.1.81 EMBL ABD81904.1

Gene names

Name:	aga50B EMBL ABD81904.1
Ordered Locus Names:	Sde_2644

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD81904.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus

Protein attributes

Sequence length	793 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABD81904.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC beta-galactosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21HC5 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: F1B957BFD25D27E3	FASTA	793	88,587
	10 20 30 40 50 60 MGAIGGLVKI NISFIPLFVI SASIFIGACN SSKLESGVDS NNISPVMLFD FENDQVPSNI 70 80 90 100 110 120 HFLNARASIE TYTGINGEPS KGLKLAMQSK QHSYTGLAIV PEQPWDWSEF TSASLYFDIV 130 140 150 160 170 180 SVGDHSTQFY LDVTDQNGAV FTRSIDIPVG KMQSYYAKLS GHDLEVPDSG DVNDLNLASG 190 200 210 220 230 240 LRSNPPTWTS DDRQFVWMWG VKNLDLSGIA KISLSVQSAM HDKTVIIDNI RIQPNPPQDE 250 260 270 280 290 300 NFLVGLVDEF GQNAKVDYKG KIHSLEELHA ARDVELAELD GKPMPSRSKF GGWLAGPKLK 310 320 330 340 350 360 ATGYFRTEKI NGKWMLVDPE GYPYFATGLD IIRLSNSSTM TGYDYDQATV AQRSADDVTP 370 380 390 400 410 420 EDSKGLMAVS EKSFATRHLA SPTRAAMFNW LPDYDHPLAN HYNYRRSAHS GPLKRGEAYS 430 440 450 460 470 480 FYSANLERKY GETYPGSYLD KWREVTVDRM LNWGFTSLGN WTDPAYYDNN RIPFFANGWV 490 500 510 520 530 540 IGDFKTVSSG ADFWGAMPDV FDPEFKVRAM ETARVVSEEI KNSPWCVGVF IDNEKSFGRP 550 560 570 580 590 600 DSDKAQYGIP IHTLGRPSEG VPTRQAFSKL LKAKYKTIAA LNNAWGLKLS SWAEFDLGVD 610 620 630 640 650 660 VKALPVTDTL RADYSMLLSA YADQYFKVVH GAVEHYMPNH LYLGARFPDW GMPMEVVKAA 670 680 690 700 710 720 AKYADVVSYN SYKEGLPKQK WAFLAELDKP SIIGEFHIGA MDHGSYHPGL IHAASQADRG 730 740 750 760 770 780 EMYKDYMQSV IDNPYFVGAH WFQYMDSPLT GRAYDGENYN VGFVDVTDTP YQEMVDAAKE 790 VNAKIYTERL GSK

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed: 18516288] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD81904.1.
RefSeq	YP_528116.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21HC5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21HC5.
Protein family/group databases
CAZy	GH50. Glycoside Hydrolase Family 50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3968502.
GenomeReviews	Gene locus Sde_2644 in contig CP000282_GR.
KEGG	sde:Sde_2644.
NMPDR	fig|203122.1.peg.790.
PATRIC	23404370. VBISacDeg56404_2850.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG10914.
HOGENOM	HBG217192.
OMA	LDGENGH.
ProtClustDB	CLSK569844.
Enzyme and pathway databases
BioCyc	SDEG203122:SDE_2644-MONOMER.
Family and domain databases
InterPro	IPR013529. Glyco_hydro_42_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01219.
Pfam	PF02449. Glyco_hydro_42. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q21HC5_SACD2

Accession

Primary (citable) accession number: Q21HC5

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)