Q21HB9 (Q21HB9_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
B-agarase EMBL ABD81910.1
EC=3.2.1.81 EMBL ABD81910.1

Gene names

Name:	aga86C EMBL ABD81910.1
Ordered Locus Names:	Sde_2650

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD81910.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus

Protein attributes

Sequence length	787 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABD81910.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21HB9 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: B9EDBCB4EE1AA471	FASTA	787	86,177
	10 20 30 40 50 60 MITRPYTLLT LTLALLVSLS GCGGGGKSST TDPDPTTPEP QPDTTPASFS FTATTGASLN 70 80 90 100 110 120 STTTSNTITV SGINTATTVS VVNGQYAIDN GSFTSAEGTI NNGQTLQVQV TNSANYQTTT 130 140 150 160 170 180 TATVTIGGIS ASYSATTMAE PTQGVAIDVN PYIRHSVGGV DSFDRRKFIT IHASNTENDW 190 200 210 220 230 240 FGGNDASLGF ANESDDLITE FLEGYDVYFG RDTGGISWHL SQTLEDPAKP GFADEANMTS 250 260 270 280 290 300 RGNDTKGWYT VNPSEIAIKQ RQHEHRNTDM IIGSQQHPFW PDGKLTGQGW ALSQTETEAE 310 320 330 340 350 360 PFGTATGHYM ANFLAKFYKQ SESDPNGQPK PVYVEVMNEP LYDLVDAATN PTTPEKVFLF 370 380 390 400 410 420 HNTVADEIRK LNDDVLIGGY TVAFPDFDSN NFERWENRDK AFIDIAGEKM DFISIHLYDF 430 440 450 460 470 480 PNFQNTQRYR KGSNVEATFD MLDHYTTLTL GAPLPLIVSE YGAPDHALFK APWTPYRDGL 490 500 510 520 530 540 KLKALNSLLM SMLERPDTLL KTIPFIPVKA EWGRDGVPYN DRLMRQKFEA EGETGNEWVY 550 560 570 580 590 600 TDLVKFYQLW ADVNGTRVDS YAADMDILVD SYVDGSTLYL ILNNLEFNDE TLTLTDLGLN 610 620 630 640 650 660 NNSFVSGTMR HLHTVDGNPV LSESALANIP TNLTIGGEAT IVLALNFEND IAISETSEET 670 680 690 700 710 720 KYYATTYKQA ITANTDISFA INNVALGDQG EAILRLGIGR DHGLSLQPSV SVNGVDVEVP 730 740 750 760 770 780 SDYRGYDQFH NGTGRPNFYG VIEIPVPYSA LQTSNTVVVN FPDSTGFVTT AALQVFNTST SITRPMQ

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed: 18516288] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD81910.1.
RefSeq	YP_528122.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21HB9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21HB9.
Protein family/group databases
CAZy	GH86. Glycoside Hydrolase Family 86.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3968508.
GenomeReviews	Gene locus Sde_2650 in contig CP000282_GR.
KEGG	sde:Sde_2650.
NMPDR	fig|203122.1.peg.3287.
PATRIC	23404382. VBISacDeg56404_2856.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG127410.
HOGENOM	HBG204883.
OMA	TATGHYM.
ProtClustDB	CLSK507166.
Enzyme and pathway databases
BioCyc	SDEG203122:SDE_2650-MONOMER.
Family and domain databases
InterPro	IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01219.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q21HB9_SACD2

Accession

Primary (citable) accession number: Q21HB9

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)