Q21HB4 (Q21HB4_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
B-agarase EMBL ABD81915.1
EC=3.2.1.81 EMBL ABD81915.1

Gene names

Name:	aga86E EMBL ABD81915.1
Ordered Locus Names:	Sde_2655

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD81915.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus

Protein attributes

Sequence length	1335 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABD81915.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21HB4 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 8A34668054D16F15	FASTA	1,335	146,160
	10 20 30 40 50 60 MRNLNKNKVH ILRAAIAASM SVLPLAAGAA DYVIEAENFV AQGGTYVDGQ PNKVSVYSVN 70 80 90 100 110 120 GATAINYVNR ADYTDYQINV ATHGYYNVQY AIGTSVASGA AIELLVQNGS SWESQGQTNV 130 140 150 160 170 180 PVGHWDSFQP LNASHEVILP AGTVNLRVYG AGSNDWQWNL DSISLTLESA INPQPDPDPD 190 200 210 220 230 240 PSPQLVKTEA EAFNAQSGTF ADGQPTPVSI YTVNGKTAIN FVNKGDAVEY NLVAPAAGSY 250 260 270 280 290 300 ALKYSIGTSV ASGSEVEFFV LKNNVWVSQG KTPVPAVGWD NFTSVASAQT VELAAGSNKV 310 320 330 340 350 360 KLVGAGTNDW QWNLDFFELT LGNVEPEPEP EPEPEPEPEP EPEPEPEPEP EPEPEPEPQP 370 380 390 400 410 420 EPDGDPVPVS GSFKLEAEHF QKVGGEVQIY SLSPGNAVNY FNSGDYLEFY VDLDAGGLYE 430 440 450 460 470 480 ASFRVGTGVA SDVAVGLMVT DHKGDLTLKS VTPVTDQGGW DAFYNLTAQS QLNIYSGINT 490 500 510 520 530 540 IRITGAGSAD FQFNIDSITL TRVGPINPAL DGDNDGVPDT SDNCPSSPAN ETANAEGCVP 550 560 570 580 590 600 SQLDTDEDGI NDKIDQCDAT PAGDFVDALG CTSTGGDDDD FDGVLNGADQ CGNTPYGMNV 610 620 630 640 650 660 NAQGCSVFSG SDADNDGVAN SEDTCANTPA LEFANEQGCS SSQVANTHVV NVSVNANFKR 670 680 690 700 710 720 SVNGVFDFGR RRHMTAHTAI HEPDWVGHTD KLNYLFNTLD VYMGRDNGSA TWKFNDTTED 730 740 750 760 770 780 PNKPNWPNMD YMVERGKGLR EAHDQNPLFK RFSAEKQLLI AGTNPHALYP TLSWFPNAFT 790 800 810 820 830 840 WSGWQPKNIE TSAAWVGQYM EHYFANASNG YVGEQLPEYW EVVNEPDMKM KTGQFMVTNQ 850 860 870 880 890 900 EAIWEYHNLV AQEIRDHLGA EAPPIGGMTW GQHDFYRRDG ISRFADDSYD QWITNDDQVL 910 920 930 940 950 960 QAEARAFYRN AMATTVDDTR DQDWYQWDVM WKGFMDAAGD NMDFYSVHIY DWPGENVGDT 970 980 990 1000 1010 1020 TVVRRGGHTS AMLEMMEWYD VKRNGFNNRK PIVLSEYGSV NGAWDNRAHE ERYDIASIKA 1030 1040 1050 1060 1070 1080 FNGMLMQFLE RPDYVIKSLP FTPAKPLWGY LPGGCGYDDA VACTTRYHYA MLIEDELNSG 1090 1100 1110 1120 1130 1140 NWEWSSYIKF YELWADIDGT RVDSKSSDVD VQVDSYVKGN ELFVILNNLE AADTTVNLDV 1150 1160 1170 1180 1190 1200 SGIASVQNVE LRNMHFDIQE THLDRHHMSA APKTVTLAAD ATVVLRYTLA SSVAVNNTVV 1210 1220 1230 1240 1250 1260 EKKYFGESVS GGIEPHRISV AGGAKTLYIN NVSVPSGYSE AILRLTVSLY PDEDDKVGGH 1270 1280 1290 1300 1310 1320 LSLDSITVNG TAIEAPIDWK GPKANRAERF FGVLDIPVPV ELLQSTNTIA VDFRHNGELT 1330 VANLIVSEFT SEPNR

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed: 18516288] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD81915.1.
RefSeq	YP_528127.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21HB4.
SMR	Q21HB4. Positions 31-166, 186-320.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21HB4.
Protein family/group databases
CAZy	CBM6. Carbohydrate-Binding Module Family 6. GH86. Glycoside Hydrolase Family 86.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3968513.
GenomeReviews	Gene locus Sde_2655 in contig CP000282_GR.
KEGG	sde:Sde_2655.
NMPDR	fig|203122.1.peg.3292.
PATRIC	23404394. VBISacDeg56404_2862.
Organism-specific databases
CMR	Search...
Enzyme and pathway databases
BioCyc	SDEG203122:SDE_2655-MONOMER.
Family and domain databases
InterPro	IPR006584. Cellulose-bd_IV. IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
KO	K01219.
Pfam	PF03422. CBM_6. 3 hits. [Graphical view]
SMART	SM00606. CBD_IV. 3 hits. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 3 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51175. CBM6. 3 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q21HB4_SACD2

Accession

Primary (citable) accession number: Q21HB4

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)