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Q21GI4

- Q21GI4_SACD2

UniProt

Q21GI4 - Q21GI4_SACD2

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Protein

Alpha-amylase

Gene
Sde_2938
Organism
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSDEG203122:GI2M-2986-MONOMER.

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Sde_2938Imported
OrganismiSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)Imported
Taxonomic identifieri203122 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeSaccharophagus
ProteomesiUP000001947: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi203122.Sde_2938.

Structurei

3D structure databases

ProteinModelPortaliQ21GI4.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000253313.
KOiK01176.
OMAiVAINHES.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q21GI4-1 [UniParc]FASTAAdd to Basket

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MRKLTQLFIF AAALFSICSH AQPRTAFVHL FEWQWNDIAS ECENVLGPKG    50
YAAVQVSPPQ KSVSSSQWWS RYQPVSYAIE GRSGNRNEFA SMVSRCKNAG 100
VDIYVDAVIN HMAAGGRYYP EVPYYAEHFH TCYGQIDYGN RWQVQNCDLV 150
GLNDLATEQD YVRTKIANYL NDLTNLGVAG FRFDAAKHIP VGDIAAIKAK 200
LIGNPYIFQE VIGAPGEPIQ PSEYTYLADV TEFNFTKSVS HFFKGRGPIK 250
ELKNIGTWGG WVASADAVTF VANHDNQRQD TNNTITHKDG DNRNTMAHVF 300
MLGWPYGYPK VMSSYEWYDH DQGPPAHGAS SCNSGWLCEH RTPAIANMVA 350
FRNFTADEFR VTNYWDNGNN QIAWGRGGKG FVVINMEGNN LTRTFQTGMP 400
AGRYCDIISG NYNASNKSCS GNIIDVDNNG NAVITAYYRN GAAIHVGAIV 450
EDCDGTDCCT NCPTEKVETT FSCSNGSTYW GQSVYVIGNQ EELGNWNPAH 500
AVKLDASAYP TWTGTIELTQ NTDVEWKCLK RDEQTPSNGV VWQGGANNQF 550
NTGTTNAYPT GSF 563
Length:563
Mass (Da):62,406
Last modified:April 18, 2006 - v1
Checksum:i4CD20937CE003596
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000282 Genomic DNA. Translation: ABD82195.1.
RefSeqiWP_011469411.1. NC_007912.1.
YP_528407.1. NC_007912.1.

Genome annotation databases

EnsemblBacteriaiABD82195; ABD82195; Sde_2938.
GeneIDi3968028.
KEGGisde:Sde_2938.
PATRICi23404994. VBISacDeg56404_3160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000282 Genomic DNA. Translation: ABD82195.1 .
RefSeqi WP_011469411.1. NC_007912.1.
YP_528407.1. NC_007912.1.

3D structure databases

ProteinModelPortali Q21GI4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 203122.Sde_2938.

Protein family/group databases

CAZyi CBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

DNASUi 3968028.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD82195 ; ABD82195 ; Sde_2938 .
GeneIDi 3968028.
KEGGi sde:Sde_2938.
PATRICi 23404994. VBISacDeg56404_3160.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000253313.
KOi K01176.
OMAi VAINHES.
OrthoDBi EOG6RZB1B.

Enzyme and pathway databases

BioCyci SDEG203122:GI2M-2986-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 2-40 / ATCC 43961 / DSM 17024.

Entry informationi

Entry nameiQ21GI4_SACD2
AccessioniPrimary (citable) accession number: Q21GI4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: September 3, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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