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Q21GI4 (Q21GI4_SACD2) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length563 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q21GI4 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 4CD20937CE003596

FASTA56362,406
        10         20         30         40         50         60 
MRKLTQLFIF AAALFSICSH AQPRTAFVHL FEWQWNDIAS ECENVLGPKG YAAVQVSPPQ 

        70         80         90        100        110        120 
KSVSSSQWWS RYQPVSYAIE GRSGNRNEFA SMVSRCKNAG VDIYVDAVIN HMAAGGRYYP 

       130        140        150        160        170        180 
EVPYYAEHFH TCYGQIDYGN RWQVQNCDLV GLNDLATEQD YVRTKIANYL NDLTNLGVAG 

       190        200        210        220        230        240 
FRFDAAKHIP VGDIAAIKAK LIGNPYIFQE VIGAPGEPIQ PSEYTYLADV TEFNFTKSVS 

       250        260        270        280        290        300 
HFFKGRGPIK ELKNIGTWGG WVASADAVTF VANHDNQRQD TNNTITHKDG DNRNTMAHVF 

       310        320        330        340        350        360 
MLGWPYGYPK VMSSYEWYDH DQGPPAHGAS SCNSGWLCEH RTPAIANMVA FRNFTADEFR 

       370        380        390        400        410        420 
VTNYWDNGNN QIAWGRGGKG FVVINMEGNN LTRTFQTGMP AGRYCDIISG NYNASNKSCS 

       430        440        450        460        470        480 
GNIIDVDNNG NAVITAYYRN GAAIHVGAIV EDCDGTDCCT NCPTEKVETT FSCSNGSTYW 

       490        500        510        520        530        540 
GQSVYVIGNQ EELGNWNPAH AVKLDASAYP TWTGTIELTQ NTDVEWKCLK RDEQTPSNGV 

       550        560 
VWQGGANNQF NTGTTNAYPT GSF 

« Hide

References

[1]"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T."
Weiner R.M., Taylor L.E.II., Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S.
PLoS Genet. 4:E1000087-E1000087(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2-40 / ATCC 43961 / DSM 17024.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000282 Genomic DNA. Translation: ABD82195.1.
RefSeqYP_528407.1. NC_007912.1.

3D structure databases

ProteinModelPortalQ21GI4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203122.Sde_2938.

Protein family/group databases

CAZyCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

DNASU3968028.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD82195; ABD82195; Sde_2938.
GeneID3968028.
KEGGsde:Sde_2938.
PATRIC23404994. VBISacDeg56404_3160.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000253313.
KOK01176.
OMASGNELEF.
OrthoDBEOG6RZB1B.

Enzyme and pathway databases

BioCycSDEG203122:GI2M-2986-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21GI4_SACD2
AccessionPrimary (citable) accession number: Q21GI4
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: April 16, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)