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Q21GI4

- Q21GI4_SACD2

UniProt

Q21GI4 - Q21GI4_SACD2

Protein

Alpha-amylase

Gene

Sde_2938

Organism
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (18 Apr 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciSDEG203122:GI2M-2986-MONOMER.

    Protein family/group databases

    CAZyiCBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Sde_2938Imported
    OrganismiSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)Imported
    Taxonomic identifieri203122 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeSaccharophagus
    ProteomesiUP000001947: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi203122.Sde_2938.

    Structurei

    3D structure databases

    ProteinModelPortaliQ21GI4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiVAINHES.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q21GI4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRKLTQLFIF AAALFSICSH AQPRTAFVHL FEWQWNDIAS ECENVLGPKG    50
    YAAVQVSPPQ KSVSSSQWWS RYQPVSYAIE GRSGNRNEFA SMVSRCKNAG 100
    VDIYVDAVIN HMAAGGRYYP EVPYYAEHFH TCYGQIDYGN RWQVQNCDLV 150
    GLNDLATEQD YVRTKIANYL NDLTNLGVAG FRFDAAKHIP VGDIAAIKAK 200
    LIGNPYIFQE VIGAPGEPIQ PSEYTYLADV TEFNFTKSVS HFFKGRGPIK 250
    ELKNIGTWGG WVASADAVTF VANHDNQRQD TNNTITHKDG DNRNTMAHVF 300
    MLGWPYGYPK VMSSYEWYDH DQGPPAHGAS SCNSGWLCEH RTPAIANMVA 350
    FRNFTADEFR VTNYWDNGNN QIAWGRGGKG FVVINMEGNN LTRTFQTGMP 400
    AGRYCDIISG NYNASNKSCS GNIIDVDNNG NAVITAYYRN GAAIHVGAIV 450
    EDCDGTDCCT NCPTEKVETT FSCSNGSTYW GQSVYVIGNQ EELGNWNPAH 500
    AVKLDASAYP TWTGTIELTQ NTDVEWKCLK RDEQTPSNGV VWQGGANNQF 550
    NTGTTNAYPT GSF 563
    Length:563
    Mass (Da):62,406
    Last modified:April 18, 2006 - v1
    Checksum:i4CD20937CE003596
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000282 Genomic DNA. Translation: ABD82195.1.
    RefSeqiWP_011469411.1. NC_007912.1.
    YP_528407.1. NC_007912.1.

    Genome annotation databases

    EnsemblBacteriaiABD82195; ABD82195; Sde_2938.
    GeneIDi3968028.
    KEGGisde:Sde_2938.
    PATRICi23404994. VBISacDeg56404_3160.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000282 Genomic DNA. Translation: ABD82195.1 .
    RefSeqi WP_011469411.1. NC_007912.1.
    YP_528407.1. NC_007912.1.

    3D structure databases

    ProteinModelPortali Q21GI4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 203122.Sde_2938.

    Protein family/group databases

    CAZyi CBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    DNASUi 3968028.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD82195 ; ABD82195 ; Sde_2938 .
    GeneIDi 3968028.
    KEGGi sde:Sde_2938.
    PATRICi 23404994. VBISacDeg56404_3160.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi VAINHES.
    OrthoDBi EOG6RZB1B.

    Enzyme and pathway databases

    BioCyci SDEG203122:GI2M-2986-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2-40 / ATCC 43961 / DSM 17024Imported.

    Entry informationi

    Entry nameiQ21GI4_SACD2
    AccessioniPrimary (citable) accession number: Q21GI4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2006
    Last sequence update: April 18, 2006
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3