Q21DU2 (Q21DU2_SACD2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-galactosidase. Glycosyl Hydrolase family 2 EMBL ABD83137.1
EC=3.2.1.23 EMBL ABD83137.1

Gene names

Name:	gal2A EMBL ABD83137.1
Ordered Locus Names:	Sde_3882

Organism

Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [Complete proteome] [HAMAP] EMBL ABD83137.1

Taxonomic identifier

203122 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Saccharophagus › Saccharophagus degradans

Protein attributes

Sequence length	961 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABD83137.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21DU2 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 476DD5D66B894F1F	FASTA	961	107,051
	10 20 30 40 50 60 MKISLYYHGR VVGRLVLLLA VLFGSSAAFA AEQEDGRERL SLNRGWYFHL GDVPMAPIKG 70 80 90 100 110 120 HSESYMNAKA GNAPGPAGRE FDDSEWRRLD LPHDWAVEGP FDPNENISQG YRPRGISWYR 130 140 150 160 170 180 RYLRVEESDR GRYFELQFDA IATHATVWVN GNVVKRNYSG YNASYIDITP YIRYGDAMNT 190 200 210 220 230 240 IAVKVDATQM EGWWYEGAGM YRHTWLVKAN PVHIVTDGLH ATPRLESETL EGGKWSIPVE 250 260 270 280 290 300 VTLNNSGENL QTVTVEVTVT APNGKQVAKQ SGNVTVPVLG EAVAKLPVTI QSPALWSHEQ 310 320 330 340 350 360 TNLYRVNAVV KHGKRVIDEI ALSTGFRTVR FDSQQGFFLN DKHVKLQGVC IHQDHAGVGV 370 380 390 400 410 420 AVPTSIWQYR LRRLKELGVN AIRFSHNAPA VEVLDLVDSM GFLVMDENRN FNPSPDYMQQ 430 440 450 460 470 480 LEWMVRRDRH HPGIILWSVF NEEPVQASEV GYQMVRRMVA AVKALDDTRP VTAAMNGGFF 490 500 510 520 530 540 SDLNVSHAVD VLGANYQVPD YDRFHAARPE MPFTSSEDTS AFMMRGEFTT DYDKNLIASY 550 560 570 580 590 600 DEDFAFWGNS HRDAWQAVAT RDYVAGAFVW TGFDYRGEPT PLAWPSVSSF FGIMDLNGFA 610 620 630 640 650 660 KTAYYIHRAQ WVKDEPQAYL APHWNWAGKE GQIIPVLVMA NVDKVQLLLN GKSLGEQVVD 670 680 690 700 710 720 PFQMNTFDVA YQPGKLEVIG YSSGKEVVRN SVETTGKAVA VQLVPDRKAL VGDGFDAMPI 730 740 750 760 770 780 TVQAVDAKGR VVPTDNSLIH FEISGAGQSI GHGNGNPNSH EDEKGATRHL FNGLAQLIVQ 790 800 810 820 830 840 SHYESSGNIT VKASSPGLKT AKVSIPVKKV AAVPYVASQT APNVHLSDWR TSPVASQRPD 850 860 870 880 890 900 PTQKVADNDM NSWGWGQPPF MSQAKGETAP ARYRLYRTNF TPRKNLARGD GELFIGDVVG 910 920 930 940 950 960 RVEVWLNDEL LYKKDNVRKQ NLRLPIPKGE GNRELTFLLE DEGQDNAVIG GPVIVQPKGK K

References

[1]

"Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T." Weiner R.M., Taylor L.E. II, Henrissat B., Hauser L., Land M., Coutinho P.M., Rancurel C., Saunders E.H., Longmire A.G., Zhang H., Bayer E.A., Gilbert H.J., Larimer F., Zhulin I.B., Ekborg N.A., Lamed R., Richardson P.M., Borovok I., Hutcheson S. PLoS Genet. 4:E1000087-E1000087(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 2-40 / ATCC 43961 / DSM 17024.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000282 Genomic DNA. Translation: ABD83137.1.
RefSeq	YP_529349.1. NC_007912.1.
3D structure databases
ProteinModelPortal	Q21DU2.
ModBase	Search...
Protein-protein interaction databases
STRING	203122.Sde_3882.
Protein family/group databases
CAZy	GH2. Glycoside Hydrolase Family 2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD83137; ABD83137; Sde_3882.
GeneID	3967107.
KEGG	sde:Sde_3882.
PATRIC	23407035. VBISacDeg56404_4178.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3250.
HOGENOM	HOG000022809.
KO	K01190.
OMA	MGSNAYR.
ProtClustDB	CLSK751994.
Enzyme and pathway databases
BioCyc	SDEG203122:GI2M-3932-MONOMER.
Family and domain databases
Gene3D	2.60.40.320. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR008979. Galactose-bd-like. IPR013812. Glyco_hydro_2/20_Ig-like. IPR006102. Glyco_hydro_2_Ig-like. IPR006104. Glyco_hydro_2_N. IPR006103. Glyco_hydro_2_TIM. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Pfam	PF00703. Glyco_hydro_2. 1 hit. PF02836. Glyco_hydro_2_C. 1 hit. PF02837. Glyco_hydro_2_N. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF49303. Glyco_hydro_2Ig. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q21DU2_SACD2

Accession

Primary (citable) accession number: Q21DU2

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)