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Q21BQ1 (GLGA_RHOPB) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:RPC_0612
OrganismRhodopseudomonas palustris (strain BisB18) [Complete proteome] [HAMAP]
Taxonomic identifier316056 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 489489Glycogen synthase HAMAP-Rule MF_00484
PRO_0000241798

Sites

Binding site181ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q21BQ1 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 813D7C633F89EB82

FASTA48951,850
        10         20         30         40         50         60 
MTAVTALSVA SEIYPLIKTG GLADVAGALP AALLPHGVTM RTLVPGYPAV LAGIESAAPV 

        70         80         90        100        110        120 
HSFAMLFGGP ARLLAARKGG LDLFVLEAPH LYDRPGSPYS GPDGKDWPDN AYRFAALART 

       130        140        150        160        170        180 
AAEIGQGLVP SFVPDIIHAH DWQAGLTPAY LRYSGKPQPA TVFTVHNLAF QGQFPRELLA 

       190        200        210        220        230        240 
TLGLPPGAFS VDGVEYYGSI GYMKSGLQLS DRITTVSPAY ALEIQGPQAG MGLDGLLRQR 

       250        260        270        280        290        300 
AAQLTGILNG IDDKVWNPAT DKRITATYDL DHLAARRANT QSVRELFDLS LDPDRLLLGV 

       310        320        330        340        350        360 
ISRLSWQKGL DLLLEALPVL LAEGIQLALL GAGDPELEER FKSAAQAYPG QIGVMIGYDE 

       370        380        390        400        410        420 
DLAHLIQAGA DALLVPSRFE PCGLTQLCAL RYGAVPVVAR VGGLSDTVVD ANEMAIAAGV 

       430        440        450        460        470        480 
ATGVQFSPVT GDMLAAALSK TRALYADRAA WQALQHNGMT ADVSWRNPAQ HYAQLYRSLL 


AARQSRATA 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisB18."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB18.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000301 Genomic DNA. Translation: ABD86185.1.
RefSeqYP_530504.1. NC_007925.1.

3D structure databases

ProteinModelPortalQ21BQ1.
SMRQ21BQ1. Positions 7-481.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316056.RPC_0612.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD86185; ABD86185; RPC_0612.
GeneID3970683.
KEGGrpc:RPC_0612.
PATRIC23265844. VBIRhoPal29154_0631.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK14099.

Enzyme and pathway databases

BioCycRPAL316056:GH3E-621-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_RHOPB
AccessionPrimary (citable) accession number: Q21BQ1
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: April 18, 2006
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways