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Reviewed, UniProtKB/Swiss-Prot Q21988 (AMX1_CAEEL)

Last modified November 24, 2009. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Amine oxidase family member 1
Gene names
Name: amx-1
ORF Names: R13G10.2
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

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Protein attributes

Sequence length824 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Cofactor

FAD Potential.

Sequence similarities

Belongs to the flavin monoamine oxidase family.

Contains 1 SWIRM domain.

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Ontologies

Keywords
   LigandFAD
Flavoprotein
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processoxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

positive regulation of growth rate

Inferred from mutant phenotype. Source: WormBase

   Molecular functionoxidoreductase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 824824Amine oxidase family member 1
PRO_0000099879

Regions

Domain245 – 346102SWIRM
Nucleotide binding352 – 40756FAD Potential

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Sequences

Sequence LengthMass (Da)Tools
Q21988-1 [UniParc].

Last modified January 15, 2008. Version 3.
Checksum: 801E8919124D4072

FASTA82493,433
        10         20         30         40         50         60 
MTTELEIDDR KEEEAQIPGE TSESEEGDEP VKMNRVKRAC AMAAESLKEA KRIKNMLMEE 

        70         80         90        100        110        120 
ECVLQLGNCK KTASYGHRLS KTEACCPSCF SVAFRGKDYE NEFTIWKQKA MDGQTHVRSE 

       130        140        150        160        170        180 
QFVKRYVNSC FLPYYAKCHQ CSKYSKLITS DSLSAQQLSD FKCDCASTIE SPKIERVRED 

       190        200        210        220        230        240 
SEWCFNEFGH PPLLQNNISY DLLVDHYVTR TTGMDATCQE KAALIDNGGI EFRDTRRIMN 

       250        260        270        280        290        300 
MFYVPFTDVI ANIVHPEFME TDEKFAFPKF ADDPISIYYL QVRNTIIAMW LKHPFVELTV 

       310        320        330        340        350        360 
KMIEPQIIVR GHARIFFIEH LIHPILEFLT IKGVVNYGAF DFRIDPLNGM RPKIAIIGAG 

       370        380        390        400        410        420 
ISGISTARHL KHLGIDAVLF EAKDRFGGRM MDDQSLGVSV GKGAQIIVGN INNPITLLCE 

       430        440        450        460        470        480 
QIGIKYRNSN FFCPLIDENG RCFTLERKEL DDQVDLHYNN VLDAIRNKYQ SDRNFPDVPL 

       490        500        510        520        530        540 
EVTNFRHFTE MFSKMSSGLL SAADLDSLYT PEFEKLLDFH LGNLEFSCGT HVSNLSAKDY 

       550        560        570        580        590        600 
DHNEKFGNFA GEHAVITDGA QRIIDFLATG LDIRLNCPVK CIDWGRDDRK VKIFFENAEQ 

       610        620        630        640        650        660 
AAEEFDKVVI TTSLSVLKSN HSKMFVPPLP IEKQKAIDDL GAGLIEKIAV KFDRRFWDTV 

       670        680        690        700        710        720 
DADGLRTEYF GKVSDCKTDR SLFNIFYDFS GKDPNGEDTF VLMSYVTAEH VNLVNVLTES 

       730        740        750        760        770        780 
EVADKFCATL RKMFPSAVIN PLGHMMSHWG ADRFVGMSYT FVPFGSDGDA TYNQLKKSID 

       790        800        810        820 
EKLYFAGEHT IAAEPQTMAG AYISGLREAG QIVMSLKRDS ATFE

« Hide

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

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Cross-references

Sequence databases

Z35602 Genomic DNA. Translation: CAA84671.3.
PIRT24218.
RefSeqNP_497772.2.
UniGeneCel.5940

3D structure databases

ModBaseSearch...

Genome annotation databases

EnsemblR13G10.2; R13G10.2; R13G10.2; Caenorhabditis elegans. [Genome view]
GeneID175493.
KEGGcel:R13G10.2.
NMPDRfig|6239.3.peg.9222.
UCSCR13G10.2. c. elegans.

Organism-specific databases

CTD175493.
WormBaseWBGene00000137. amx-1.
WormPepR13G10.2. CE41445. [WorfDB]

Gene expression databases

ArrayExpressQ21988.

Family and domain databases

InterProIPR002937. Amino_oxidase.
IPR007526. SWIRM.
[Graphical view]
PfamPF01593. Amino_oxidase. 1 hit.
[Graphical view]
PROSITEPS50934. SWIRM. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio888390.

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Entry information

Entry nameAMX1_CAEEL
AccessionPrimary (citable) accession number: Q21988
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 15, 2008
Last modified: November 24, 2009
This is version 59 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectCaenorhabditis annotation project

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Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormPep

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents