Q21948 (Q21948_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein R11G1.1 EMBL CCD62660.1

Gene names

ORF Names:

CELE_R11G1.1 EMBL CCD62660.1, R11G1.1 EMBL CCD62660.1 WormBase R11G1.1

Organism

Caenorhabditis elegans [Reference proteome] EMBL CCD62660.1

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	1656 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q21948 [UniParc]. Last modified October 1, 2002. Version 2. Checksum: 7D141B1B3C933314	FASTA	1,656	181,139
	10 20 30 40 50 60 MLTVCLYLVV FPIFASSQFL SYDAIRMRVP GRCMLGDYDC GLGQCVPISQ FRDGKPDCMD 70 80 90 100 110 120 GSDEWCFIGQ VSCGPVYCAD YKDALPCIVY PKCDGSSKQL PWCSTSKEKL CADETSFPCK 130 140 150 160 170 180 GYGECVLWEW LLDGKKDCND GSDEDENYVM PLEHAYRCAR NQSGLYLPKP VPPPPEDHPS 190 200 210 220 230 240 LYVEGCSMCS KPSTVTLPSN PVIDYTTPKY PFITSPLLGN TKPPLSNFPV FPSEESKLGD 250 260 270 280 290 300 FFPEPSGVEI SRVTGFHKPN EPIGDFFPTH SSTPVPPTEA VTQSHTFRLI TIPSISQTQF 310 320 330 340 350 360 PQAPLIFPGR PDLPPITAPS PLNNWPIPIV TTTPDPHHQG PLPPITYPTI EEGSEKIPPI 370 380 390 400 410 420 KPGIIISRPV TSRKPDLPSE FEYGGGTGDG ISQPPGMNPF DMLTRPSVPM TTPGPFDMFP 430 440 450 460 470 480 NVPPVDLRPV TRPWESEKTK PYPGVTIPDE QKSGTDTLIP LIPGRILPTF ATPRPLSIPS 490 500 510 520 530 540 FFTTPQSPHR PFVTQNPPHE GFIEEKTLLT PSTNNAQTTQ IDRNLTPKTT TLKATSRTKI 550 560 570 580 590 600 IHVGPNGVVE EIDNNESTKI ENETNLGEHE GQIVPGSDKV IHIGPTVKTT PTPSSGTSTI 610 620 630 640 650 660 VTENSSTFES VSTSSVPTTT VKTGDPQVDD CLRRMSDSGG SVICDCPNGQ FKNTGNGQCE 670 680 690 700 710 720 ETLSLVVVKV KVNTVCNTDK ASLEQKQRIL HQKIGQSYKS CIRSAEHDSA LVAIVQCSDC 730 740 750 760 770 780 TLQEIDRLLT TRSFGEPGNL NLTAEALGTD LCSNSEFNHC HVYSDCILDD ENLRYACKCK 790 800 810 820 830 840 KGTTDSSDGY GRSCEGFPEE SDCVMVFGIC LIVWLIFLLG SFFLSLLACI ACYALCRKRC 850 860 870 880 890 900 CRYIAIHPAN ADGLQTVVVG QKAAKSLEMD GNREKLPHMK AIFAESLKHS AKGSTSVASA 910 920 930 940 950 960 FALADFKRKK VSRPPDMSQV IEEVNENPTA SIHNSESLPK VSSLAKISTH TANSEPPTPV 970 980 990 1000 1010 1020 GVIETPILEK NSSSVSLVSA NDNAPQLPSL PLPLPVPITT SASTTNLEET TGKENGREGG 1030 1040 1050 1060 1070 1080 GGSHASAQEQ QVPETERPAS SHSVGVQPTI WETYRVLGQQ YSKSDLTERK ASVDSLEQMF 1090 1100 1110 1120 1130 1140 EARLAETSRT TKTIPTVRTD KSDNSAIIFT AKPYKKDTEK ETDSKLADMI GVTSFHKPDT 1150 1160 1170 1180 1190 1200 PSRPDSGKKD AKVIPKTGQV ESEPYSPTLE KSLEAALLIE MAKRGIELPL SPKTPIPIAT 1210 1220 1230 1240 1250 1260 ELEKAASANF ATAETSEDSE VKPYQPQTPK KPESRKSSAK SSASSKRSKI PSTSQSRVGS 1270 1280 1290 1300 1310 1320 AKKQISQIDE QDKEPDVFVP QGAKAIYQTK RILRRSGGAG GVNELVPSTD ESDPEVAFFK 1330 1340 1350 1360 1370 1380 KLDRIKQDSR NYPAHPYRKY SRRRKPERTL SSISEKSAEI AAEAALDYPQ DTSISCPATT 1390 1400 1410 1420 1430 1440 RTFLEPRFSM APRYVFKRKV VEASEETSDV DMPRLSPARH APPVVSSPEI PDVSLQRSME 1450 1460 1470 1480 1490 1500 NLHKLESKVK PQPPYPQTPT KKSNLMKKKT GKNESSASHP SSSLQSSRHS SKFASKATTP 1510 1520 1530 1540 1550 1560 RTGDATPASM TSRSTRHSVI SRKIAIRRQE LKAVTGSARD LSGSRVDRVI PTHSLRGAKS 1570 1580 1590 1600 1610 1620 VGDLSKRQPN WDISPYRDTP GPSSFLPPIT PSRHVRTAAN SPQPRHRRSD SHFSMTSLPL 1630 1640 1650 IAHSPTSFWS SPHFHPSEDS KKPPKEDLWW NPNKRS

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." Caenorhabditis elegans Sequencing Consortium Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2 EMBL CCD62660.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO080291 Genomic DNA. Translation: CCD62660.1.
PIR	T16720.
RefSeq	NP_508629.2. NM_076228.4.
3D structure databases
HSSP	HSSP built from PDB template 1JRF based on UniProtKB P98162.
ProteinModelPortal	Q21948.
SMR	Q21948. Positions 28-65, 109-146.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	R11G1.1; R11G1.1; R11G1.1.
GeneID	187815.
KEGG	cel:CELE_R11G1.1.
UCSC	R11G1.1. c. elegans.
Organism-specific databases
CTD	187815.
WormBase	R11G1.1; CE31051; WBGene00020010.
Phylogenomic databases
eggNOG	NOG121371.
GeneTree	ENSGT00600000085218.
HOGENOM	HOG000020227.
InParanoid	Q21948.
OMA	MPLEHAY.
Family and domain databases
Gene3D	4.10.400.10. 2 hits.
InterPro	IPR000742. EG-like_dom. IPR002172. LDrepeatLR_classA_rpt. [Graphical view]
Pfam	PF00057. Ldl_recept_a. 1 hit. [Graphical view]
SMART	SM00181. EGF. 1 hit. SM00192. LDLa. 2 hits. [Graphical view]
SUPFAM	SSF57424. LDL_rcpt_classA_cys-rich. 2 hits.
PROSITE	PS50068. LDLRA_2. 2 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	936600.

Entry information

Entry name

Q21948_CAEEL

Accession

Primary (citable) accession number: Q21948

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	October 1, 2002
Last modified:	May 1, 2013
This is version 81 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)