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Protein

60S ribosomal protein L28

Gene

rpl-28

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L28
Gene namesi
Name:rpl-28
ORF Names:R11D1.8
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiR11D1.8; CE06313; WBGene00004442; rpl-28.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001223932 – 12660S ribosomal protein L28Add BLAST125

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ21930.
PaxDbiQ21930.
PeptideAtlasiQ21930.
PRIDEiQ21930.

Expressioni

Gene expression databases

BgeeiWBGene00004442.

Interactioni

Protein-protein interaction databases

BioGridi44759. 2 interactors.
DIPiDIP-24374N.
IntActiQ21930. 1 interactor.
MINTiMINT-1095802.
STRINGi6239.R11D1.8.1.

Structurei

3D structure databases

ProteinModelPortaliQ21930.
SMRiQ21930.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3412. Eukaryota.
ENOG4111T32. LUCA.
HOGENOMiHOG000200513.
InParanoidiQ21930.
KOiK02903.
OMAiMSDALVW.
OrthoDBiEOG091G0W22.
PhylomeDBiQ21930.

Family and domain databases

InterProiView protein in InterPro
IPR029004. L28e/Mak16.
IPR002672. Ribosomal_L28e.
PANTHERiPTHR10544. PTHR10544. 1 hit.
PfamiView protein in Pfam
PF01778. Ribosomal_L28e. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q21930-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDALVWQVI RNNSAFLRTQ RGIGKRFSTE KFNLKKVNSP KYSGLANKHA
60 70 80 90 100
IDVSAAAKGV VVSTKNEKGR PAKAVTTSTL SKTPVASVRR LAKNAGFNKF
110 120
NKLAQRRAAA IVRSQVKKAK VQKTDA
Length:126
Mass (Da):13,725
Last modified:January 23, 2007 - v3
Checksum:i075EDF6CD3F56E68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z75547 Genomic DNA. Translation: CAA99898.1.
PIRiT24181.
RefSeqiNP_506180.1. NM_073779.5.
UniGeneiCel.6544.

Genome annotation databases

EnsemblMetazoaiR11D1.8.1; R11D1.8.1; WBGene00004442.
R11D1.8.2; R11D1.8.2; WBGene00004442.
GeneIDi179739.
KEGGicel:CELE_R11D1.8.
UCSCiR11D1.8.5. c. elegans.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL28_CAEEL
AccessioniPrimary (citable) accession number: Q21930
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 25, 2002
Last sequence update: January 23, 2007
Last modified: June 7, 2017
This is version 109 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families