Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

GAlactosidase/N-Acetylgalactosaminidase

Gene

gana-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • glycoside catabolic process Source: WormBase
  • glycosylceramide catabolic process Source: GO_Central
  • oligosaccharide metabolic process Source: GO_Central

Keywordsi

Molecular functionGlycosidaseUniRule annotationSAAS annotation, Hydrolase

Enzyme and pathway databases

ReactomeiR-CEL-1660662. Glycosphingolipid metabolism.
R-CEL-6798695. Neutrophil degranulation.

Protein family/group databases

CAZyiGH27. Glycoside Hydrolase Family 27.

Names & Taxonomyi

Protein namesi
Submitted name:
GAlactosidase/N-AcetylgalactosaminidaseImported
Gene namesi
Name:gana-1Imported
ORF Names:CELE_R07B7.11Imported, R07B7.11Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiR07B7.11; CE06273; WBGene00011095; gana-1.

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500419969122 – 451Sequence analysisAdd BLAST430

Keywords - PTMi

Disulfide bondUniRule annotation

Proteomic databases

EPDiQ21801.
PaxDbiQ21801.
PeptideAtlasiQ21801.

Expressioni

Gene expression databases

BgeeiWBGene00011095.

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi6239.R07B7.11.

Structurei

3D structure databases

ProteinModelPortaliQ21801.
SMRiQ21801.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini309 – 397Melibiase_2_CInterPro annotationAdd BLAST89

Sequence similaritiesi

Belongs to the glycosyl hydrolase 27 family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG2366. Eukaryota.
ENOG410XPF1. LUCA.
GeneTreeiENSGT00390000008751.
HOGENOMiHOG000161224.
InParanoidiQ21801.
KOiK01204.
OMAiSQFITRV.
OrthoDBiEOG091G0BGV.
PhylomeDBiQ21801.

Family and domain databases

CDDicd14792. GH27. 1 hit.
Gene3Di3.20.20.70. 1 hit.
InterProiView protein in InterPro
IPR013785. Aldolase_TIM.
IPR002241. Glyco_hydro_27.
IPR000111. Glyco_hydro_27/36_CS.
IPR017853. Glycoside_hydrolase_SF.
IPR035373. Melibiase/NAGA_C.
PfamiView protein in Pfam
PF16499. Melibiase_2. 1 hit.
PF17450. Melibiase_2_C. 1 hit.
PRINTSiPR00740. GLHYDRLASE27.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiView protein in PROSITE
PS00512. ALPHA_GALACTOSIDASE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q21801-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLLLPLLFC VGAFCLDNGL GRTPPMGWMS WTAFYCEIDC VKHPTGCINE
60 70 80 90 100
QLYKDMADQL VSGGYDKVGY KSVHIDDCWS EMERDSHGIL VANKTRFPSG
110 120 130 140 150
MKALAKYMHD RGLKFGIYED YGTKTCGGYP GSYKHEKVDA QTFAAWDVDY
160 170 180 190 200
LKLDGCNIDQ AMMPIGYPLF EKELNETGRP IMYSCSWPAY LIDHPELVNY
210 220 230 240 250
NLIGKYCNTW RNFDDINSSW KSIISIISYY DKMQDKHIPT HGPGKWHDPD
260 270 280 290 300
MLVIGNKGIT LDMSISQFTV WCIWSAPLIM SNDLRIIGDS FKDVLKNKEA
310 320 330 340 350
IKINQDPLGI MGRLIKNSTD IGVYVKQITP SKGDKKSFAF AYLNRNEKEG
360 370 380 390 400
YKRIEIQLAS IGLTDPAGYY VHDIWSHVDL GLLRSGDSIV VSIAPAGSVF
410 420 430 440 450
FRADLASLHQ PKGKRRYKFD NSNVVYEFER EQSQLGRFDF GDYLRTNRVQ

F
Length:451
Mass (Da):51,424
Last modified:November 1, 1996 - v1
Checksum:iF7BB2B0D5D5C6419
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB00120.1.
PIRiT24018.
RefSeqiNP_506031.1. NM_073630.5.
UniGeneiCel.2869.

Genome annotation databases

EnsemblMetazoaiR07B7.11; R07B7.11; WBGene00011095.
GeneIDi179660.
KEGGicel:CELE_R07B7.11.
UCSCiR07B7.11. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ21801_CAEEL
AccessioniPrimary (citable) accession number: Q21801
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 30, 2017
This is version 134 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported