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Q217M3 (FCTA_RHOPB) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Formyl-coenzyme A transferase
Short name=Formyl-CoA transferase
EC=2.8.3.16
Gene names
Name:frc
Ordered Locus Names:RPC_1854
OrganismRhodopseudomonas palustris (strain BisB18) [Complete proteome] [HAMAP]
Taxonomic identifier316056 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length426 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate By similarity. HAMAP MF_00742

Catalytic activity

Formyl-CoA + oxalate = formate + oxalyl-CoA. HAMAP MF_00742

Pathway

Metabolic intermediate degradation; oxalate degradation; CO(2) and formate from oxalate: step 1/2. HAMAP MF_00742

Sequence similarities

Belongs to the CaiB/BaiF CoA-transferase family.

Ontologies

Keywords
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionformyl-CoA transferase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 426426Formyl-coenzyme A transferase HAMAP MF_00742
PRO_0000300991

Sites

Active site1681Nucleophile By similarity
Binding site961Coenzyme A By similarity

Sequences

Sequence LengthMass (Da)Tools
Q217M3 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 07B3D182F7ABE30B

FASTA42646,440
        10         20         30         40         50         60 
MTKALNGVRI LDFTHVQSGP TCTQLLAWFG ADVIKVERPG VGDITRGQLQ DIPNVDSLYF 

        70         80         90        100        110        120 
TMLNHNKRSI TLDTKNPKGK EVLTALIKSC DVLVENFGPG VLDRMGFSWE KIQSLNPKMI 

       130        140        150        160        170        180 
VASIKGFGPG PYEDCKVYEN VAQCTGGAAS TTGFRDGLPL VTGAQIGDSG TGLHLALGIV 

       190        200        210        220        230        240 
TALYQRTVTG RGQKVTAAMQ DGVLNLSRVK LRDQQRLAHG PLKEYSQFGE GIPFGDAVPR 

       250        260        270        280        290        300 
AGNDSGGGQP GRILKCKGWE TDPNAYIYFI TQAPVWEKIC DVIGEPDWKT HPDYAKPAAR 

       310        320        330        340        350        360 
LKHLNDIFAR IEQWTMTKTK FEAMDILNKD DIPCGPILSM KELAEDQSLR ATGTVVEVDH 

       370        380        390        400        410        420 
PTRGKYLSVG NPIKMSDSPT EVMRSPLLGE HTDEILRQVL GFSDQQVAEV HDSGALEPPR 


KAAAAE

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisB18."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB18.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000301 Genomic DNA. Translation: ABD87413.1.
RefSeqYP_531732.1. NC_007925.1.

3D structure databases

ProteinModelPortalQ217M3.
SMRQ217M3. Positions 1-417.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ217M3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3971868.
GenomeReviewsGene locus RPC_1854 in contig CP000301_GR.
KEGGrpc:RPC_1854.
PATRIC23268414. VBIRhoPal29154_1906.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1804.
HOGENOMHBG659028.
OMAQFGEGIP.
ProtClustDBPRK05398.

Enzyme and pathway databases

BioCycRPAL316056:RPC_1854-MONOMER.

Family and domain databases

HAMAPMF_00742. Formyl-CoA_transfer.
[Tree]
InterProIPR003673. CoA-Trfase_fam_III.
IPR023606. CoA-Trfase_III_dom.
IPR017659. Formyl-CoA_transferase.
[Graphical view]
Gene3DG3DSA:3.40.50.10540. CoA-Trfase_fam_III. 1 hit.
KOK07749.
PANTHERPTHR11837. CAIB_BAIF. 1 hit.
PfamPF02515. CoA_transf_3. 1 hit.
[Graphical view]
SUPFAMSSF89796. CoA-Trfase_fam_III. 1 hit.
TIGRFAMsTIGR03253. Oxalate_frc. 1 hit.
ProtoNetSearch...

Entry information

Entry nameFCTA_RHOPB
AccessionPrimary (citable) accession number: Q217M3
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: April 18, 2006
Last modified: January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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