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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_R05G6.9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_R05G6.9Imported, R05G6.9Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiR05G6.9; CE35359; WBGene00019901.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 378358Sequence analysisPRO_5004199655Add
BLAST

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiQ21756.
PRIDEiQ21756.

Interactioni

Protein-protein interaction databases

STRINGi6239.R05G6.9.

Structurei

3D structure databases

ProteinModelPortaliQ21756.
SMRiQ21756. Positions 133-377.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini39 – 7638EGF-likeInterPro annotationAdd
BLAST
Domaini124 – 16037EGF-likeInterPro annotationAdd
BLAST
Domaini174 – 21037EGF-likeInterPro annotationAdd
BLAST
Domaini213 – 24937EGF-likeInterPro annotationAdd
BLAST
Domaini252 – 28837EGF-likeInterPro annotationAdd
BLAST
Domaini298 – 33437EGF-likeInterPro annotationAdd
BLAST
Domaini335 – 37238EGF-likeInterPro annotationAdd
BLAST

Keywords - Domaini

EGF-like domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1217. Eukaryota.
ENOG410XP6K. LUCA.
GeneTreeiENSGT00840000132063.
HOGENOMiHOG000018028.
InParanoidiQ21756.
OMAiGNGICLG.
OrthoDBiEOG7MPRJQ.
PhylomeDBiQ21756.

Family and domain databases

InterProiIPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR009030. Growth_fac_rcpt_.
[Graphical view]
PfamiPF00008. EGF. 1 hit.
PF12661. hEGF. 3 hits.
[Graphical view]
SMARTiSM00181. EGF. 7 hits.
SM00179. EGF_CA. 4 hits.
[Graphical view]
SUPFAMiSSF57184. SSF57184. 1 hit.
PROSITEiPS00022. EGF_1. 7 hits.
PS01186. EGF_2. 6 hits.
PS50026. EGF_3. 7 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q21756-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLSKHIILI SVIFVAAVES GRYRRQGLPG LGGLDGFNDL LPCNAFTRCN
60 70 80 90 100
GKGLCLGTAK QSTCMCFLGW SGDSCDSVAN LMDPFNLFSN NNNNNNNNQL
110 120 130 140 150
FPNLFPTASS LNLLNNPFGL DDDALEMCTA SDCNGNGVCV GSKKAPLCLC
160 170 180 190 200
NLGKTGFKCE SEISGLLNMD PSAPITFCSP SDCNNKGLCL GTKNSFSCAC
210 220 230 240 250
QIGYTGSRCE KTPVALCDSR DCSSNGLCIG TKDSMTCACY LGYSGDKCEK
260 270 280 290 300
ITGTMCEASD CNSNGICIGT KNLKSCICAP GYYGSRCESR FALLPGTEGM
310 320 330 340 350
FCEAKDCNGN GICIGNKLLP MCICAPGFTG LRCELEPLCT GALQCSGNGL
360 370
CIGSLKSYSC TCNLGWTGPT CAQSTLIG
Length:378
Mass (Da):39,654
Last modified:October 1, 2003 - v2
Checksum:i616EF337DEBF2322
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CCD71558.1.
PIRiT29359.
RefSeqiNP_501215.2. NM_068814.5.
UniGeneiCel.12511.

Genome annotation databases

EnsemblMetazoaiR05G6.9; R05G6.9; WBGene00019901.
GeneIDi187624.
KEGGicel:CELE_R05G6.9.
UCSCiR05G6.9. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CCD71558.1.
PIRiT29359.
RefSeqiNP_501215.2. NM_068814.5.
UniGeneiCel.12511.

3D structure databases

ProteinModelPortaliQ21756.
SMRiQ21756. Positions 133-377.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.R05G6.9.

Proteomic databases

PaxDbiQ21756.
PRIDEiQ21756.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiR05G6.9; R05G6.9; WBGene00019901.
GeneIDi187624.
KEGGicel:CELE_R05G6.9.
UCSCiR05G6.9. c. elegans.

Organism-specific databases

CTDi187624.
WormBaseiR05G6.9; CE35359; WBGene00019901.

Phylogenomic databases

eggNOGiKOG1217. Eukaryota.
ENOG410XP6K. LUCA.
GeneTreeiENSGT00840000132063.
HOGENOMiHOG000018028.
InParanoidiQ21756.
OMAiGNGICLG.
OrthoDBiEOG7MPRJQ.
PhylomeDBiQ21756.

Miscellaneous databases

NextBioi935898.

Family and domain databases

InterProiIPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR009030. Growth_fac_rcpt_.
[Graphical view]
PfamiPF00008. EGF. 1 hit.
PF12661. hEGF. 3 hits.
[Graphical view]
SMARTiSM00181. EGF. 7 hits.
SM00179. EGF_CA. 4 hits.
[Graphical view]
SUPFAMiSSF57184. SSF57184. 1 hit.
PROSITEiPS00022. EGF_1. 7 hits.
PS01186. EGF_2. 6 hits.
PS50026. EGF_3. 7 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ21756_CAEEL
AccessioniPrimary (citable) accession number: Q21756
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: October 1, 2003
Last modified: May 11, 2016
This is version 130 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.