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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

RPC_2184

Organism
Rhodopseudomonas palustris (strain BisB18)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPAL316056:GH3E-2209-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:RPC_2184Imported
OrganismiRhodopseudomonas palustris (strain BisB18)Imported
Taxonomic identifieri316056 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001948: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316056.RPC_2184.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3QFWX-ray1.79A/B2-368[»]
ProteinModelPortaliQ216E8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230274.
KOiK01601.
OMAiIEQSVEC.
OrthoDBiEOG6MM1J2.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

Q216E8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEPRIVATY HIASDAERIE QRALALAIEQ SVECPLEAIG DPAIVANIVG
60 70 80 90 100
RVEDVAELQP GRYAVRIGLA AATAPAEPGQ LLNMLFGNSS IQPDIALADV
110 120 130 140 150
ELPAHYLTAF GGPRVGLAGI RTLTGAQSRA LTASALKPQG LSPAALASIA
160 170 180 190 200
HQLALGGVDL IKDDHGLADQ AFSPFAERAA AVGKAVREAN AARGGRTLYA
210 220 230 240 250
PNISGTLDDM RRQLGVIRDE GIGAVLVAPM IVGVSNFHAI VKEAAGLVVV
260 270 280 290 300
AHPAMAGAAK IAAPLLLGRL FRLFGADATV FPNYGGRFAY STASCLALAQ
310 320 330 340 350
AARDPFGKLN ACIPTPAGGI MLQRVNELLR FYGQDVMLLI GGSLLASRER
360
LTEQASRFVN KVADYGQR
Length:368
Mass (Da):38,412
Last modified:April 18, 2006 - v1
Checksum:i4D92F5366524779C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000301 Genomic DNA. Translation: ABD87738.1.
RefSeqiYP_532057.1. NC_007925.1.

Genome annotation databases

EnsemblBacteriaiABD87738; ABD87738; RPC_2184.
GeneIDi3969166.
KEGGirpc:RPC_2184.
PATRICi23269078. VBIRhoPal29154_2238.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000301 Genomic DNA. Translation: ABD87738.1.
RefSeqiYP_532057.1. NC_007925.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3QFWX-ray1.79A/B2-368[»]
ProteinModelPortaliQ216E8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316056.RPC_2184.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD87738; ABD87738; RPC_2184.
GeneIDi3969166.
KEGGirpc:RPC_2184.
PATRICi23269078. VBIRhoPal29154_2238.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230274.
KOiK01601.
OMAiIEQSVEC.
OrthoDBiEOG6MM1J2.

Enzyme and pathway databases

BioCyciRPAL316056:GH3E-2209-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB18Imported.
  2. "Crystal structure of Rubisco-like protein from Rhodopseudomonas palustris."
    Fedorov A.A., Fedorov E.V., Gerlt J.A., Burley S.K., Almo S.C.
    Submitted (JAN-2011) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.79 ANGSTROMS) OF 2-368.

Entry informationi

Entry nameiQ216E8_RHOPB
AccessioniPrimary (citable) accession number: Q216E8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: January 7, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.