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Q216E8

- Q216E8_RHOPB

UniProt

Q216E8 - Q216E8_RHOPB

Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

RPC_2184

Organism
Rhodopseudomonas palustris (strain BisB18)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (18 Apr 2006)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei292 – 2921Sulfate 2Imported
    Binding sitei326 – 3261Sulfate 3Imported
    Binding sitei330 – 3301Sulfate 3Imported

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciRPAL316056:GH3E-2209-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:RPC_2184Imported
    OrganismiRhodopseudomonas palustris (strain BisB18)Imported
    Taxonomic identifieri316056 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
    ProteomesiUP000001948: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi316056.RPC_2184.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3QFWX-ray1.79A/B2-368[»]
    ProteinModelPortaliQ216E8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni127 – 1293Sulfate 1 bindingImported

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1850.
    HOGENOMiHOG000230274.
    KOiK01601.
    OMAiEPGQLLN.
    OrthoDBiEOG6MM1J2.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    InterProiIPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q216E8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTEPRIVATY HIASDAERIE QRALALAIEQ SVECPLEAIG DPAIVANIVG    50
    RVEDVAELQP GRYAVRIGLA AATAPAEPGQ LLNMLFGNSS IQPDIALADV 100
    ELPAHYLTAF GGPRVGLAGI RTLTGAQSRA LTASALKPQG LSPAALASIA 150
    HQLALGGVDL IKDDHGLADQ AFSPFAERAA AVGKAVREAN AARGGRTLYA 200
    PNISGTLDDM RRQLGVIRDE GIGAVLVAPM IVGVSNFHAI VKEAAGLVVV 250
    AHPAMAGAAK IAAPLLLGRL FRLFGADATV FPNYGGRFAY STASCLALAQ 300
    AARDPFGKLN ACIPTPAGGI MLQRVNELLR FYGQDVMLLI GGSLLASRER 350
    LTEQASRFVN KVADYGQR 368
    Length:368
    Mass (Da):38,412
    Last modified:April 18, 2006 - v1
    Checksum:i4D92F5366524779C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000301 Genomic DNA. Translation: ABD87738.1.
    RefSeqiYP_532057.1. NC_007925.1.

    Genome annotation databases

    EnsemblBacteriaiABD87738; ABD87738; RPC_2184.
    GeneIDi3969166.
    KEGGirpc:RPC_2184.
    PATRICi23269078. VBIRhoPal29154_2238.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000301 Genomic DNA. Translation: ABD87738.1 .
    RefSeqi YP_532057.1. NC_007925.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3QFW X-ray 1.79 A/B 2-368 [» ]
    ProteinModelPortali Q216E8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316056.RPC_2184.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD87738 ; ABD87738 ; RPC_2184 .
    GeneIDi 3969166.
    KEGGi rpc:RPC_2184.
    PATRICi 23269078. VBIRhoPal29154_2238.

    Phylogenomic databases

    eggNOGi COG1850.
    HOGENOMi HOG000230274.
    KOi K01601.
    OMAi EPGQLLN.
    OrthoDBi EOG6MM1J2.

    Enzyme and pathway databases

    BioCyci RPAL316056:GH3E-2209-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    InterProi IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BisB18Imported.
    2. "Crystal structure of Rubisco-like protein from Rhodopseudomonas palustris."
      Fedorov A.A., Fedorov E.V., Gerlt J.A., Burley S.K., Almo S.C.
      Submitted (JAN-2011) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (1.79 ANGSTROMS) OF 2-368.

    Entry informationi

    Entry nameiQ216E8_RHOPB
    AccessioniPrimary (citable) accession number: Q216E8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2006
    Last sequence update: April 18, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3