Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot Q21565 (AMT3_CAEEL)

Last modified November 24, 2009. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Hide | Top

Names and origin

Protein namesRecommended name:
    Putative ammonium transporter 3
Gene names
Name: amt-3
ORF Names: M195.3
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Hide | Top

Protein attributes

Sequence length687 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Hide | Top

General annotation (Comments)

Function

Involved in the uptake of ammonia Probable.

Subcellular location

Membrane; Multi-pass membrane protein Probable.

Sequence similarities

Belongs to the ammonium transporter (TC 2.A.49) family. [View classification]

Hide | Top

Ontologies

Keywords
   Biological processAmmonia transport
Transport
   Cellular componentMembrane
   DomainTransmembrane
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processammonium transport

Inferred from electronic annotation. Source: UniProtKB-KW

transmembrane transport

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionammonium transmembrane transporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Hide | Top

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 687687Putative ammonium transporter 3
PRO_0000139753

Regions

Transmembrane39 – 5921 Potential
Transmembrane77 – 9721 Potential
Transmembrane134 – 15421 Potential
Transmembrane162 – 18221 Potential
Transmembrane196 – 21621 Potential
Transmembrane240 – 26021 Potential
Transmembrane272 – 29221 Potential
Transmembrane299 – 31921 Potential
Transmembrane323 – 34321 Potential
Transmembrane352 – 37221 Potential
Transmembrane404 – 42421 Potential

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q21565-1 [UniParc].

Last modified April 11, 2003. Version 2.
Checksum: 90EA97A928918E01

FASTA68773,938
        10         20         30         40         50         60 
MAGPEGSIFN ASAMQIVQIH HYAEGSVTPE VDKLYQDDAV WIISSSFIIF TMHSGFGLLE 

        70         80         90        100        110        120 
SGSVSAKDEV NIMVKNVVDV VFGGLSYWSC GFGFSYGDIP EWRNPYVGFG KFFYDPTRDY 

       130        140        150        160        170        180 
GTRETINQEG WSYASFLFQL SLATTASTIV SGAVAERAKL KSYILLGCIV ILIQALPAHW 

       190        200        210        220        230        240 
VWDKEGVFYK KGVVDFAGCS AVHLVGGIIG LIATVFLKPR RNRFNEDSVH QMSSPTNALL 

       250        260        270        280        290        300 
GTFLLWWGWF GINAGSVWGI TGGRWRLGAR AAVATIMASI GGGATAITIS FVKTKKLQVN 

       310        320        330        340        350        360 
FLINGILSSI VSITAICAVS RPWHALVIGS ISSVFSIAVL PLLDRLHIDD PVGIVPIHLT 

       370        380        390        400        410        420 
SSIWGMIAVG IFCEEDKYLG SATNNRSGLL YSWSFELLWV QLQCTAAILI YSATTGFLAL 

       430        440        450        460        470        480 
FLISKSPLGL RVTDYEEQIG ADVIEHGLAG TNVARYVLEK PLSTRTFQTV TKAITKWKML 

       490        500        510        520        530        540 
AKKKSRQKRM EAAKLKRQEE QETFTNGTAI ANGNGNVLHH RTNATESNGT GAPKRSNGPA 

       550        560        570        580        590        600 
FNNQITPLAV SSTVSTARNG PSTGRRTEST AIEIEQPIEA VPPEVVAAAV LPPEERPGPS 

       610        620        630        640        650        660 
TNSNVSIEAS VEKSPSSSTS RRSISIRSSP SIHTVSAIST AAPDSRPSTA SATSIISKKS 

       670        680 
SKNSTVGKFV KAPAPRALSP PDNNPPV

« Hide

Hide | Top

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

Hide | Top

Cross-references

Sequence databases

Z66498 Genomic DNA. Translation: CAA91293.2.
PIRT23804.
RefSeqNP_495761.2.
UniGeneCel.5140

3D structure databases

ModBaseSearch...

Genome annotation databases

EnsemblM195.3; M195.3; M195.3; Caenorhabditis elegans. [Genome view]
GeneID174338.
KEGGcel:M195.3.
UCSCM195.3. c. elegans.

Organism-specific databases

CTD174338.
WormBaseWBGene00000135. amt-3.
WormPepM195.3. CE32912. [WorfDB]

Phylogenomic databases

OMAWHALVIG

Gene expression databases

ArrayExpressQ21565.

Family and domain databases

InterProIPR001905. Ammonium_transpt.
IPR018047. Ammonium_transpt_CS.
[Graphical view]
PANTHERPTHR11730. Ammonium_transpt. 1 hit.
PfamPF00909. Ammonium_transp. 1 hit.
[Graphical view]
TIGRFAMsTIGR00836. amt. 1 hit.
PROSITEPS01219. AMMONIUM_TRANSP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio883614.

Hide | Top

Entry information

Entry nameAMT3_CAEEL
AccessionPrimary (citable) accession number: Q21565
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: April 11, 2003
Last modified: November 24, 2009
This is version 57 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectCaenorhabditis annotation project

Hide | Top

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormPep

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents