Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q214N4 (Q214N4_RHOPB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:RPC_2602
OrganismRhodopseudomonas palustris (strain BisB18) [Complete proteome] [HAMAP]
Taxonomic identifier316056 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length541 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD88152.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential EMBL ABD88152.1
Chain25 – 541517 Potential EMBL ABD88152.1
PRO_5000113758

Sequences

Sequence LengthMass (Da)Tools
Q214N4 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 8A1647287FEF6C16

FASTA54159,181
        10         20         30         40         50         60 
MEPISLRTPL ALLLVSLGLI VAAWWWLATP VALVRAPIDP SDKLECVSYA PFRGSQTPLI 

        70         80         90        100        110        120 
ASTQIAPEQI AQDLAQLATI SKCVRTYSVQ NGLDQVPALA EKVGLKVIQG IWLGSNRYKN 

       130        140        150        160        170        180 
LAEIATVVGL TKEYPGVISS VVVGNEVLLR GEMTAADLAA TIRMVKPQVK VPVTYADVWE 

       190        200        210        220        230        240 
YWLRNREVYE AVDFVTIHIL PYWEDFPVRA KYAASHVDSI RKRIGVAFPG KEILIGETGW 

       250        260        270        280        290        300 
PSAGRMREGA LPSRTNQARV VSEILDLAKK EKFRVNLIEA YDQPWKRQLE GTVGGFWGLI 

       310        320        330        340        350        360 
DADQRALKYP AGQSVNNYPL WKIYLGCGLG LSILVFGAAM LTMRRRPWSP RLLSWFAVTA 

       370        380        390        400        410        420 
SATSAGILFG VAADKMLYES LGVGGWLCWG ALLGAATLAP ILSASALISG RALPSFLELV 

       430        440        450        460        470        480 
GPREGRTPSW LARGLGLTLL ITTVIAAMTA LGFLFDPRYR DFPFAALTMA VVPFFALMLL 

       490        500        510        520        530        540 
NRPKTGTRPI AEAVFAGVFV VTALYTGFNE GPNNWQSLWT CAGYVLLGLT LWQARGEQTP 


K 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisB18."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB18.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000301 Genomic DNA. Translation: ABD88152.1.
RefSeqYP_532471.1. NC_007925.1.

3D structure databases

ProteinModelPortalQ214N4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ214N4.

Protein family/group databases

CAZyGH17. Glycoside Hydrolase Family 17.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3970711.
GenomeReviewsGene locus RPC_2602 in contig CP000301_GR.
KEGGrpc:RPC_2602.
PATRIC23269964. VBIRhoPal29154_2674.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5309.
HOGENOMHBG336726.
OMAVWEYWLR.
ProtClustDBCLSK911239.

Enzyme and pathway databases

BioCycRPAL316056:RPC_2602-MONOMER.

Family and domain databases

InterProIPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ214N4_RHOPB
AccessionPrimary (citable) accession number: Q214N4
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)