Q213T0 (Q213T0_RHOPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine--tRNA ligase EMBL ABD88356.1
EC=6.1.1.6 EMBL ABD88356.1

Gene names

Ordered Locus Names:

RPC_2808

Organism

Rhodopseudomonas palustris (strain BisB18) [Complete proteome] [HAMAP]

Taxonomic identifier

316056 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	350 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q213T0 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 0B9887CD288F59A3	FASTA	350	38,928
	10 20 30 40 50 60 MDETSPISPW WTPSRHLDRA PFLRARAEIT RATRQWFADR GFIEVETGIL QASPGNETHL 70 80 90 100 110 120 HAPRTELTTG SGERLCRYLR TSPEFACKKL LAAGEQKIVE FARVFRDRER GDLHLPEFTM 130 140 150 160 170 180 LEWYRAGAPY QAVVDDCVAV IGEAARAAGT RLFAFRGRIA DPFAAPQLLS VAQAFRSFTD 190 200 210 220 230 240 IDLLASIGGG EPDRAALAAM AQRWVKVSDD DDWSDIFSKI LVEHIEPNLG QGQLTVLCEY 250 260 270 280 290 300 PAPEAALART LPSDPRVAER FEVYACGVEL ANGFGELTDA QEQRARFTKA MDEKQRRYGE 310 320 330 340 350 RYPLDEEFLE AVGQMPEASG VALGFDRLVM LAAGARRIDE VVWTPPAGTP

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisB18." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisB18.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000301 Genomic DNA. Translation: ABD88356.1.
RefSeq	YP_532675.1. NC_007925.1.
3D structure databases
ProteinModelPortal	Q213T0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q213T0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3970113.
GenomeReviews	Gene locus RPC_2808 in contig CP000301_GR.
KEGG	rpc:RPC_2808.
PATRIC	23270388. VBIRhoPal29154_2883.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2269.
HOGENOM	HBG631383.
OMA	MPEASGI.
ProtClustDB	CLSK864945.
Enzyme and pathway databases
BioCyc	RPAL316056:RPC_2808-MONOMER.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q213T0_RHOPB

Accession

Primary (citable) accession number: Q213T0

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)