Protein K08F8.2, confirmed by transcript evidence - Caenorhabditis elegans

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Unreviewed, UniProtKB/TrEMBL Q21361 (Q21361_CAEEL)

Last modified June 16, 2009. Version 65. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Protein K08F8.2, confirmed by transcript evidence EMBL CAA91284.1

Gene names

Name:	atf-2 EMBL CAA91284.1
ORF Names:	K08F8.2 EMBL CAA91284.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	401 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the bZIP family. RuleBase RU000470V2

Contains 1 bZIP domain. Spearmint SPM011700

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU000470V2
Ligand	DNA-binding RuleBase RU000470V2
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	protein dimerization activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q22174	1	EBI-317743,EBI-311938
ces-2	Q94126	1	EBI-317743,EBI-328155
eya-1	O17670	1	EBI-317743,EBI-311862
gei-4	Q9TZ38	1	EBI-317743,EBI-329192
kin-10	P28548	1	EBI-317743,EBI-317777
pha-4	Q17381	1	EBI-317743,EBI-321384
tag-260	P92004	1	EBI-317743,EBI-316398

Sequences

Sequence

Length

Mass (Da)

Tools

Q21361-1 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 74FCFBA375FBE7B3
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401

43,836

        10         20         30         40         50         60 
MDVDSASLSP SSRLSVVCSA SAEFSSSSSD SSNFSEGSPP ESRRNSVNES VIKDEHYWER 

        70         80         90        100        110        120 
RRRNNDASRR SREKRRQNDL AMEEKIMLLS AENERLKSQL GTTPIPQPSV TEPPTSLIIP 

       130        140        150        160        170        180 
QVAKNLFPAG PIASLQASSM LTVPLLQAAS HIPSMLQLCQ LQPTTIQSPV YASTQQPAST 

       190        200        210        220        230        240 
SASSLFSSSS SSAFHPFRPS ESAQQSFPSS SVIVKIERRS PDSSTDVNMP QPQLQPGSSV 

       250        260        270        280        290        300 
IQQIGQPAPS GTPQPVIQAV QQGPSLLSAL LSQRRPSPTV PQSRTEHISG LNSPPRHTGN 

       310        320        330        340        350        360 
KSDCESVSSS ASFSPSHSSE DHSNYSNKSP QYVDRRRRNN EAAKRCRANR RAVFEYRSRR 

       370        380        390        400 
VQLLEGENED LRTQIETLKA EIAHFKSVLA QRASVVTALH P

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
	Z66497 Genomic DNA. Translation: CAA91284.1.
PIR	T23490.
RefSeq	NP_495861.1.
UniGene	Cel.4969
3D structure databases
HSSP	HSSP built from PDB template 1YSA based on UniProtKB P03069.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:25386N.
IntAct	Q21361. 8 interactions.
Genome annotation databases
Ensembl	K08F8.2. Caenorhabditis elegans. [Contig view]
GeneID	174399.
KEGG	cel:K08F8.2.
NMPDR	fig\|6239.3.peg.6719.
Organism-specific databases
WormBase	WBGene00000220. atf-2.
WormPep	K08F8.2. CE03468. [WorfDB]
Phylogenomic databases
OMA	Q21361. RRAVFEY.
Gene expression databases
ArrayExpress	Q21361.
Family and domain databases
InterPro	IPR011700. bZIP_2. IPR004827. TF_bZIP. [Graphical view]
Pfam	PF07716. bZIP_2. 2 hits. [Graphical view]
SMART	SM00338. BRLZ. 2 hits. [Graphical view]
PROSITE	PS50217. BZIP. 2 hits. PS00036. BZIP_BASIC. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	883874.

Entry information

Entry name

Q21361_CAEEL

Accession

Primary (citable) accession number: Q21361

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	June 16, 2009
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information