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Q210G6

- Q210G6_RHOPB

UniProt

Q210G6 - Q210G6_RHOPB

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
RPC_3685
Organism
Rhodopseudomonas palustris (strain BisB18)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRPAL316056:GH3E-3737-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:RPC_3685Imported
OrganismiRhodopseudomonas palustris (strain BisB18)Imported
Taxonomic identifieri316056 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001948: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316056.RPC_3685.

Structurei

3D structure databases

ProteinModelPortaliQ210G6.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiNGLPDFQ.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q210G6-1 [UniParc]FASTAAdd to Basket

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MARSHRGFPV TLDNLKLYRK KRDFEKTAEP SGEAKVAPSQ RRRFVIQKHD    50
ATRLHYDLRL EFDGVFKSWA VTRGPSLDPH DKRLAVEVED HPLDYGDFEG 100
TIPEGQYGGG TVQLWDRGYW EADDPERGFK TGDLKFTLHG EKLHGSWVLV 150
RMRNDRSGGK RTNWLLIKHR DDDAREGDAN DILAQEASVA SGRAMEEIAA 200
GKGRAPKPFM VKAARAKADA VWDSNRGLAA EARGEREAPA KRRAASRPAK 250
QAKAKQAKAK PAKRAKAKAV AAMPDFIAPQ LCSSVERPPG GAGWGHEIKF 300
DGYRVQLRVE GGQATLKTRK GLDWTRKFRA IADQAAALPD AIIDTEIVAL 350
DAAGAPDFAA LQAALSDENT DNLICFAFDL LFAEGEDLRA LPLSERKQRL 400
QEMLEQARGR RKQSVIRYVE HFESGGDAIL QSACKMSLEG IVSKKLDAPY 450
RSGRSESWTK AKCRAGHEVV IGGWKSNAGK FRSLMVGVHR DDHLAYVGIV 500
GTGFGQVMVK RIMPALKANA SNENPFGGKT APKKTAEVHW LKPELVAEIE 550
FAGFTGAGMV RQAAFKGLRQ DKPAEEVEAE TPKKTAVAEP GRGKRGGKAK 600
AGAAKPAASK PAAAKPGHPA QVMGVLISKP DKQLWPDASD GEPVTKLDLA 650
RYFEAVGDWM LPHIKGRPCS IVRAPDGIKG EQFFQRHAMP GTSNLLELVS 700
VSGDRKPYLQ VDRVEGLAAV AQIGGLELHA WNCAPDAPDV PGRFVFDLDP 750
APDVAFSDVV AAAREMRERL TALGLESFCK TTGGKGLHVV TPLSKSKDNV 800
DWKQAKAFAQ AVCRQMAEDS PERYLLNMSK KLREGKIFLD YLRNDRMATA 850
VAVLSPRARD GATVSMPLTW PQVKGDLDPK RFTLRTVPGL LAKSKAWAGY 900
DEAATPLKAA IKRLASSGTT 920
Length:920
Mass (Da):100,502
Last modified:April 18, 2006 - v1
Checksum:i040B276810784EF6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000301 Genomic DNA. Translation: ABD89220.1.
RefSeqiYP_533539.2. NC_007925.1.

Genome annotation databases

EnsemblBacteriaiABD89220; ABD89220; RPC_3685.
GeneIDi3971658.
KEGGirpc:RPC_3685.
PATRICi23272188. VBIRhoPal29154_3772.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000301 Genomic DNA. Translation: ABD89220.1 .
RefSeqi YP_533539.2. NC_007925.1.

3D structure databases

ProteinModelPortali Q210G6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316056.RPC_3685.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD89220 ; ABD89220 ; RPC_3685 .
GeneIDi 3971658.
KEGGi rpc:RPC_3685.
PATRICi 23272188. VBIRhoPal29154_3772.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi NGLPDFQ.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci RPAL316056:GH3E-3737-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB18Imported.

Entry informationi

Entry nameiQ210G6_RHOPB
AccessioniPrimary (citable) accession number: Q210G6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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