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Q210G6

- Q210G6_RHOPB

UniProt

Q210G6 - Q210G6_RHOPB

Protein
Submitted name:

ATP dependent DNA ligase

Gene

RPC_3685

Organism
Rhodopseudomonas palustris (strain BisB18)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (18 Apr 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRPAL316056:GH3E-3737-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:RPC_3685Imported
    OrganismiRhodopseudomonas palustris (strain BisB18)Imported
    Taxonomic identifieri316056 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
    ProteomesiUP000001948: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi316056.RPC_3685.

    Structurei

    3D structure databases

    ProteinModelPortaliQ210G6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiNGLPDFQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q210G6-1 [UniParc]FASTAAdd to Basket

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    MARSHRGFPV TLDNLKLYRK KRDFEKTAEP SGEAKVAPSQ RRRFVIQKHD    50
    ATRLHYDLRL EFDGVFKSWA VTRGPSLDPH DKRLAVEVED HPLDYGDFEG 100
    TIPEGQYGGG TVQLWDRGYW EADDPERGFK TGDLKFTLHG EKLHGSWVLV 150
    RMRNDRSGGK RTNWLLIKHR DDDAREGDAN DILAQEASVA SGRAMEEIAA 200
    GKGRAPKPFM VKAARAKADA VWDSNRGLAA EARGEREAPA KRRAASRPAK 250
    QAKAKQAKAK PAKRAKAKAV AAMPDFIAPQ LCSSVERPPG GAGWGHEIKF 300
    DGYRVQLRVE GGQATLKTRK GLDWTRKFRA IADQAAALPD AIIDTEIVAL 350
    DAAGAPDFAA LQAALSDENT DNLICFAFDL LFAEGEDLRA LPLSERKQRL 400
    QEMLEQARGR RKQSVIRYVE HFESGGDAIL QSACKMSLEG IVSKKLDAPY 450
    RSGRSESWTK AKCRAGHEVV IGGWKSNAGK FRSLMVGVHR DDHLAYVGIV 500
    GTGFGQVMVK RIMPALKANA SNENPFGGKT APKKTAEVHW LKPELVAEIE 550
    FAGFTGAGMV RQAAFKGLRQ DKPAEEVEAE TPKKTAVAEP GRGKRGGKAK 600
    AGAAKPAASK PAAAKPGHPA QVMGVLISKP DKQLWPDASD GEPVTKLDLA 650
    RYFEAVGDWM LPHIKGRPCS IVRAPDGIKG EQFFQRHAMP GTSNLLELVS 700
    VSGDRKPYLQ VDRVEGLAAV AQIGGLELHA WNCAPDAPDV PGRFVFDLDP 750
    APDVAFSDVV AAAREMRERL TALGLESFCK TTGGKGLHVV TPLSKSKDNV 800
    DWKQAKAFAQ AVCRQMAEDS PERYLLNMSK KLREGKIFLD YLRNDRMATA 850
    VAVLSPRARD GATVSMPLTW PQVKGDLDPK RFTLRTVPGL LAKSKAWAGY 900
    DEAATPLKAA IKRLASSGTT 920
    Length:920
    Mass (Da):100,502
    Last modified:April 18, 2006 - v1
    Checksum:i040B276810784EF6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000301 Genomic DNA. Translation: ABD89220.1.
    RefSeqiYP_533539.2. NC_007925.1.

    Genome annotation databases

    EnsemblBacteriaiABD89220; ABD89220; RPC_3685.
    GeneIDi3971658.
    KEGGirpc:RPC_3685.
    PATRICi23272188. VBIRhoPal29154_3772.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000301 Genomic DNA. Translation: ABD89220.1 .
    RefSeqi YP_533539.2. NC_007925.1.

    3D structure databases

    ProteinModelPortali Q210G6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316056.RPC_3685.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD89220 ; ABD89220 ; RPC_3685 .
    GeneIDi 3971658.
    KEGGi rpc:RPC_3685.
    PATRICi 23272188. VBIRhoPal29154_3772.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi NGLPDFQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci RPAL316056:GH3E-3737-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BisB18Imported.

    Entry informationi

    Entry nameiQ210G6_RHOPB
    AccessioniPrimary (citable) accession number: Q210G6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2006
    Last sequence update: April 18, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3