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Q210G6

- Q210G6_RHOPB

UniProt

Q210G6 - Q210G6_RHOPB

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

RPC_3685

Organism
Rhodopseudomonas palustris (strain BisB18)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRPAL316056:GH3E-3737-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:RPC_3685Imported
OrganismiRhodopseudomonas palustris (strain BisB18)Imported
Taxonomic identifieri316056 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001948: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316056.RPC_3685.

Structurei

3D structure databases

ProteinModelPortaliQ210G6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiNGLPDFQ.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q210G6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARSHRGFPV TLDNLKLYRK KRDFEKTAEP SGEAKVAPSQ RRRFVIQKHD
60 70 80 90 100
ATRLHYDLRL EFDGVFKSWA VTRGPSLDPH DKRLAVEVED HPLDYGDFEG
110 120 130 140 150
TIPEGQYGGG TVQLWDRGYW EADDPERGFK TGDLKFTLHG EKLHGSWVLV
160 170 180 190 200
RMRNDRSGGK RTNWLLIKHR DDDAREGDAN DILAQEASVA SGRAMEEIAA
210 220 230 240 250
GKGRAPKPFM VKAARAKADA VWDSNRGLAA EARGEREAPA KRRAASRPAK
260 270 280 290 300
QAKAKQAKAK PAKRAKAKAV AAMPDFIAPQ LCSSVERPPG GAGWGHEIKF
310 320 330 340 350
DGYRVQLRVE GGQATLKTRK GLDWTRKFRA IADQAAALPD AIIDTEIVAL
360 370 380 390 400
DAAGAPDFAA LQAALSDENT DNLICFAFDL LFAEGEDLRA LPLSERKQRL
410 420 430 440 450
QEMLEQARGR RKQSVIRYVE HFESGGDAIL QSACKMSLEG IVSKKLDAPY
460 470 480 490 500
RSGRSESWTK AKCRAGHEVV IGGWKSNAGK FRSLMVGVHR DDHLAYVGIV
510 520 530 540 550
GTGFGQVMVK RIMPALKANA SNENPFGGKT APKKTAEVHW LKPELVAEIE
560 570 580 590 600
FAGFTGAGMV RQAAFKGLRQ DKPAEEVEAE TPKKTAVAEP GRGKRGGKAK
610 620 630 640 650
AGAAKPAASK PAAAKPGHPA QVMGVLISKP DKQLWPDASD GEPVTKLDLA
660 670 680 690 700
RYFEAVGDWM LPHIKGRPCS IVRAPDGIKG EQFFQRHAMP GTSNLLELVS
710 720 730 740 750
VSGDRKPYLQ VDRVEGLAAV AQIGGLELHA WNCAPDAPDV PGRFVFDLDP
760 770 780 790 800
APDVAFSDVV AAAREMRERL TALGLESFCK TTGGKGLHVV TPLSKSKDNV
810 820 830 840 850
DWKQAKAFAQ AVCRQMAEDS PERYLLNMSK KLREGKIFLD YLRNDRMATA
860 870 880 890 900
VAVLSPRARD GATVSMPLTW PQVKGDLDPK RFTLRTVPGL LAKSKAWAGY
910 920
DEAATPLKAA IKRLASSGTT
Length:920
Mass (Da):100,502
Last modified:April 18, 2006 - v1
Checksum:i040B276810784EF6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000301 Genomic DNA. Translation: ABD89220.1.
RefSeqiYP_533539.2. NC_007925.1.

Genome annotation databases

EnsemblBacteriaiABD89220; ABD89220; RPC_3685.
GeneIDi3971658.
KEGGirpc:RPC_3685.
PATRICi23272188. VBIRhoPal29154_3772.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000301 Genomic DNA. Translation: ABD89220.1 .
RefSeqi YP_533539.2. NC_007925.1.

3D structure databases

ProteinModelPortali Q210G6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316056.RPC_3685.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD89220 ; ABD89220 ; RPC_3685 .
GeneIDi 3971658.
KEGGi rpc:RPC_3685.
PATRICi 23272188. VBIRhoPal29154_3772.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi NGLPDFQ.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci RPAL316056:GH3E-3737-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB18Imported.

Entry informationi

Entry nameiQ210G6_RHOPB
AccessioniPrimary (citable) accession number: Q210G6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: October 1, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3