Unreviewed, UniProtKB/TrEMBL Q21035 (Q21035_CAEEL)

Names and origin

Protein names

Submitted name:
    Cadherin family protein 9 EMBL AAK29708.3

Gene names

Name:	cdh-9 EMBL AAK29708.3
ORF Names:	F59C12.1 EMBL AAK29708.3

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	623 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Spearmint SPM002126
Ligand	Calcium RuleBase RU000484V3
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	homophilic cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21035-1 [UniParc]. Last modified March 15, 2005. Version 3. Checksum: 87A1840CE501F5E7	FASTA	623	68,585
	10 20 30 40 50 60 MIPYLGRSLL LLALLAQYSN TCLLKNGMSS VYLSAFEDLK PGNVIGTLPF ESQTSKETDV 70 80 90 100 110 120 ELRVVKGNEL VDVKPGSHDL ILKKTLDRDE GVGKFEAVVE CRSSNLDTDF SQLNISVFVT 130 140 150 160 170 180 VKDINDNAPV FDSAEYFVDI KEELPTGTIV FTDFEATDND QPGPNSFVQY TIVAGPHSHF 190 200 210 220 230 240 LEIPDPFKPV ITIKDRINYE EIKKFSVEIE ARDQGEPSLA STVPLHVTIV DVNDLLPRFK 250 260 270 280 290 300 HSHYTAKSQK NGVLVFEPEA ISAQDGDRLN ASLIFSLSGE LSEHFAIDND GSIRSITPNP 310 320 330 340 350 360 PQRATFFVTA SEREDTERNS TAILSIRLQS SLAFQHNTYS TTISPTTPIG STVITVVANS 370 380 390 400 410 420 ENNTPLTYSL LADTNTVSID EVSGNVVLRK KLEKPETLNV TASDGENVVS TALHLMTANS 430 440 450 460 470 480 EESCRSPIKF EKFEYKMTIG KLNVLGVVNA TSRTGTKITY ILMNMNNDFE IDTNGVVKLL 490 500 510 520 530 540 PKARLQCKVC ELIVVAKSGT QMAITKINVD NPAFVLHSTT ALTLLILIIL CLIFTMLAIL 550 560 570 580 590 600 VCRKFCEKWK TGHRRSSICW LNGTTDTGIS ITTTTPNTTT RYVVNSDRDR CYESKSPGPK 610 620 RSQGAHLVPV TVTSDGSTPT VYF

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U41038 Genomic DNA. Translation: AAK29708.3.
PIR	T29878.
RefSeq	NP_510685.2.
UniGene	Cel.25005
3D structure databases
SMR	Q21035. Positions 27-127, 70-231, 121-237, 139-296.
ModBase	Search...
Genome annotation databases
Ensembl	F59C12.1; F59C12.1; F59C12.1; Caenorhabditis elegans. [Genome view]
GeneID	186608.
KEGG	cel:F59C12.1.
NMPDR	fig|6239.3.peg.25601.
UCSC	F59C12.1. c. elegans.
Organism-specific databases
CTD	186608.
WormBase	WBGene00000401. cdh-9.
WormPep	F59C12.1. CE38081. [WorfDB]
Phylogenomic databases
eggNOG	meNOG20968.
HOGENOM	HBG388178.
InParanoid	Q21035.
OMA	CYESKSP.
PhylomeDB	Q21035.
Gene expression databases
ArrayExpress	Q21035.
Family and domain databases
InterPro	IPR002126. Cadherin. IPR015919. Cadherin-like. IPR020894. Cadherin_CS. [Graphical view]
Gene3D	G3DSA:2.60.40.60. Cadherin. 1 hit.
Pfam	PF00028. Cadherin. 1 hit. [Graphical view]
PRINTS	PR00205. CADHERIN.
SMART	SM00112. CA. 3 hits. [Graphical view]
PROSITE	PS00232. CADHERIN_1. 1 hit. PS50268. CADHERIN_2. 3 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	932410.

Entry information

Entry name

Q21035_CAEEL

Accession

Primary (citable) accession number: Q21035

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	March 15, 2005
Last modified:	February 9, 2010
This is version 64 of the entry and version 3 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)