Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

AMPHiphysin homolog

Gene

amph-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • lipid tube assembly involved in organelle fission Source: WormBase
Complete GO annotation...

Enzyme and pathway databases

SignaLinkiQ21004.

Names & Taxonomyi

Protein namesi
Submitted name:
AMPHiphysin homologImported
Gene namesi
Name:amph-1Imported
ORF Names:CELE_F58G6.1Imported, F58G6.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiF58G6.1; CE03428; WBGene00010272; amph-1.

Subcellular locationi

GO - Cellular componenti

  • recycling endosome Source: WormBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiQ21004.
PaxDbiQ21004.

Interactioni

Protein-protein interaction databases

IntActiQ21004. 2 interactions.
STRINGi6239.F58G6.1.2.

Structurei

3D structure databases

ProteinModelPortaliQ21004.
SMRiQ21004. Positions 7-231, 400-461.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini20 – 237218BARInterPro annotationAdd
BLAST
Domaini398 – 46164SH3InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains BAR domain.SAAS annotation

Phylogenomic databases

eggNOGiKOG3771. Eukaryota.
ENOG410ZBW1. LUCA.
GeneTreeiENSGT00390000017588.
HOGENOMiHOG000021793.
InParanoidiQ21004.
KOiK12562.
OMAiFNANSVY.
PhylomeDBiQ21004.

Family and domain databases

Gene3Di1.20.1270.60. 1 hit.
InterProiIPR027267. AH/BAR-dom.
IPR003005. Amphiphysin.
IPR004148. BAR_dom.
IPR001452. SH3_domain.
[Graphical view]
PfamiPF03114. BAR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR01251. AMPHIPHYSIN.
SMARTiSM00721. BAR. 1 hit.
SM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS51021. BAR. 1 hit.
PS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q21004-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADLFNKHLK KATNRTKEKL LEGIGKAKAT QDEVFDQHAA NLNKQSKSCE
60 70 80 90 100
KLHKDVKNYS SALRTLLSAE KQLRDTIRDA YEPEWPDREH LTAIFDNLDI
110 120 130 140 150
QTNELEKTVC DDLPQTVTQY VNQFPDLKKK IEKRGRKLVD YDSAKNSFNS
160 170 180 190 200
VKASSKKDND PKLAKATMEL QAAEQMYTEM NNELLEILPA VFDSRITFFV
210 220 230 240 250
DTLQTLFNAN SVYQTDASKF HKQIVMQLDK LGESMDYLRV ARPEARALTP
260 270 280 290 300
IDTTSLASSD APATPDQNKS DNSSLRQTPS PSVLPSPVPA PMAKPRESVV
310 320 330 340 350
SMANSTNPFD DDDAEHDKEA TPTDVEEKFE AKVYPKLNAQ QTAAAEQAIA
360 370 380 390 400
AAKREKKEAS NPFDDEDDES TEVEEAPKKK DPEPTPKPLD GITNEKRKTL
410 420 430 440 450
YFVTSTHNYK AVDTDELSFE QGVQIKVIEA NEDDQLDDGW RLGELEDGKR
460
GVFPENFTKK V
Length:461
Mass (Da):51,911
Last modified:November 1, 1996 - v1
Checksum:i771C89E21EF7BEC8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA92465.1.
PIRiT22946.
RefSeqiNP_501711.1. NM_069310.3.
UniGeneiCel.8039.

Genome annotation databases

EnsemblMetazoaiF58G6.1.1; F58G6.1.1; WBGene00010272.
F58G6.1.2; F58G6.1.2; WBGene00010272.
GeneIDi177797.
KEGGicel:CELE_F58G6.1.
UCSCiF58G6.1.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA92465.1.
PIRiT22946.
RefSeqiNP_501711.1. NM_069310.3.
UniGeneiCel.8039.

3D structure databases

ProteinModelPortaliQ21004.
SMRiQ21004. Positions 7-231, 400-461.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ21004. 2 interactions.
STRINGi6239.F58G6.1.2.

Proteomic databases

EPDiQ21004.
PaxDbiQ21004.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF58G6.1.1; F58G6.1.1; WBGene00010272.
F58G6.1.2; F58G6.1.2; WBGene00010272.
GeneIDi177797.
KEGGicel:CELE_F58G6.1.
UCSCiF58G6.1.1. c. elegans.

Organism-specific databases

CTDi177797.
WormBaseiF58G6.1; CE03428; WBGene00010272; amph-1.

Phylogenomic databases

eggNOGiKOG3771. Eukaryota.
ENOG410ZBW1. LUCA.
GeneTreeiENSGT00390000017588.
HOGENOMiHOG000021793.
InParanoidiQ21004.
KOiK12562.
OMAiFNANSVY.
PhylomeDBiQ21004.

Enzyme and pathway databases

SignaLinkiQ21004.

Miscellaneous databases

NextBioi898426.

Family and domain databases

Gene3Di1.20.1270.60. 1 hit.
InterProiIPR027267. AH/BAR-dom.
IPR003005. Amphiphysin.
IPR004148. BAR_dom.
IPR001452. SH3_domain.
[Graphical view]
PfamiPF03114. BAR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR01251. AMPHIPHYSIN.
SMARTiSM00721. BAR. 1 hit.
SM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS51021. BAR. 1 hit.
PS50002. SH3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ21004_CAEEL
AccessioniPrimary (citable) accession number: Q21004
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.