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Q20YV5 (Q20YV5_RHOPB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
UDP-glucose 6-dehydrogenase EMBL ABD89681.1
EC=1.1.1.22 EMBL ABD89681.1
Gene names
Ordered Locus Names:RPC_4156
OrganismRhodopseudomonas palustris (strain BisB18) [Complete proteome] [HAMAP]
Taxonomic identifier316056 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD89681.1
   Molecular functionOxidoreductase EMBL ABD89681.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionNAD binding

Inferred from electronic annotation. Source: InterPro

UDP-glucose 6-dehydrogenase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL ABD89681.1
Chain22 – 438417 Potential EMBL ABD89681.1
PRO_5000114050

Sequences

Sequence LengthMass (Da)Tools
Q20YV5 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: F5FDA17069303422

FASTA43846,885
        10         20         30         40         50         60 
MKIAMIGTGY VGLVSGACFA DFGHQVTCVD KDEAKIDALR RGEIPIFEPG LDALVASNVK 

        70         80         90        100        110        120 
AGRLDFATEL SAAVGEADAV FIAVGTPSRR GDGHADLSYV HAAAREIAVA LKGFTVVVTK 

       130        140        150        160        170        180 
STVPVGTGDE VELLIRETNP TADVVIASNP EFLREGAAIR DFKFPDRIVV GTDDERGRKV 

       190        200        210        220        230        240 
LGEIYRPLSL NAAPLMYTAR RTAELIKYAA NAFLATKITF INEIADLAEK VGADVQEVAR 

       250        260        270        280        290        300 
GIGMDNRIGP KFLHAGPGFG GSCFPKDTRA LVKIALDHDV PLRIVEAVLA VNDNRKRAMA 

       310        320        330        340        350        360 
RKVSHALGGH IRGKTVAVLG LTFKPDTDDM REAPSIPLVT GLLDMGAKVR AFDPVGMEQA 

       370        380        390        400        410        420 
RAELPEVTYC DDAYACAEGA DALVIVTEWV QFRALDLGRL KAAMKQPVVV DLRNIYRPEQ 

       430 
MAAHGFVYES VGRGTGAS

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References

[1]"Complete sequence of Rhodopseudomonas palustris BisB18."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB18.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000301 Genomic DNA. Translation: ABD89681.1.
RefSeqYP_534000.1. NC_007925.1.

3D structure databases

ProteinModelPortalQ20YV5.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ20YV5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3973991.
GenomeReviewsGene locus RPC_4156 in contig CP000301_GR.
KEGGrpc:RPC_4156.
PATRIC23273136. VBIRhoPal29154_4243.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1004.
HOGENOMHBG400967.
OMAHADVQFI.
PhylomeDBQ20YV5.
ProtClustDBCLSK910809.

Enzyme and pathway databases

BioCycRPAL316056:RPC_4156-MONOMER.

Family and domain databases

InterProIPR008927. 6-PGluconate_DH_C-like.
IPR021157. Cyt_c1_TM_anchor_C.
IPR016040. NAD(P)-bd_dom.
IPR017476. Nucleotide_sugar_DH.
IPR014027. UDP-Glc/GDP-Man_DH_C.
IPR014026. UDP-Glc/GDP-Man_DH_dimer.
IPR001732. UDP-Glc/GDP-Man_DH_N.
[Graphical view]
Gene3DG3DSA:1.20.5.100. Cyt_c1_TM_anchor_C. 1 hit.
G3DSA:3.40.50.720. NAD(P)-bd. 2 hits.
KOK00012.
PfamPF00984. UDPG_MGDP_dh. 1 hit.
PF03720. UDPG_MGDP_dh_C. 1 hit.
PF03721. UDPG_MGDP_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000124. UDPglc_GDPman_dh. 1 hit.
SMARTSM00984. UDPG_MGDP_dh_C. 1 hit.
[Graphical view]
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMsTIGR03026. NDP-sugDHase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ20YV5_RHOPB
AccessionPrimary (citable) accession number: Q20YV5
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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