Q20XY7 (Q20XY7_RHOPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Short-chain dehydrogenase/reductase SDR EMBL ABD89999.1

Gene names

Ordered Locus Names:

RPC_4476

Organism

Rhodopseudomonas palustris (strain BisB18) [Complete proteome] [HAMAP] EMBL ABD89999.1

Taxonomic identifier

316056 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	306 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	oxidation-reduction process Inferred from electronic annotation. Source: GOC
Molecular_function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q20XY7 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 0F1E345CD6E751D3	FASTA	306	32,455
	10 20 30 40 50 60 MRSVSGSSTS QLHHPGSAEF GHPGSAELQH PGATELRHPG APPAAGIGAC PFHNDQRDSR 70 80 90 100 110 120 SGKQKTLVLT GASRGIGHAT GKLFSEAGWR IVTCSRQPFN DERCPWATGV EDHVEIELGD 130 140 150 160 170 180 YRALPRAIAA LKERLGGAPL HALINNAAIS PKGLEGERLT SLNTPVETWM GVFHVNLLAP 190 200 210 220 230 240 ILLAQGLFDE LRAGSGSIVN VTSIVGSRVH PFAGTAYATS KAALACLTRE MAHDYAPYGI 250 260 270 280 290 300 RVNAIAPGEI KTDILSPETE ARLAPTIPMR RIGTPDEVAK VMFFLCSDAA SYVTGEEIHI NGGQHV

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisB18." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisB18.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000301 Genomic DNA. Translation: ABD89999.1.
RefSeq	YP_534318.1. NC_007925.1.
3D structure databases
ProteinModelPortal	Q20XY7.
ModBase	Search...
Protein-protein interaction databases
STRING	316056.RPC_4476.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD89999; ABD89999; RPC_4476.
GeneID	3972488.
KEGG	rpc:RPC_4476.
PATRIC	23273822. VBIRhoPal29154_4576.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1028.
OMA	GEEIHIN.
ProtClustDB	CLSK863709.
Enzyme and pathway databases
BioCyc	RPAL316056:GH3E-4549-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. IPR020904. Sc_DH/Rdtase_CS. [Graphical view]
PRINTS	PR00081. GDHRDH. PR00080. SDRFAMILY.
PROSITE	PS00061. ADH_SHORT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q20XY7_RHOPB

Accession

Primary (citable) accession number: Q20XY7

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)