Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

AdaPtin, Mu/medium chain (Clathrin associated complex)

Gene

apm-3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • intracellular protein transport Source: InterPro
  • lipid storage Source: WormBase
  • lysosome organization Source: WormBase
  • vesicle-mediated transport Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Protein transportSAAS annotation, Transport

Enzyme and pathway databases

SignaLinkiQ20736.

Names & Taxonomyi

Protein namesi
Submitted name:
AdaPtin, Mu/medium chain (Clathrin associated complex)Imported
Gene namesi
Name:apm-3Imported
ORF Names:CELE_F53H8.1Imported, F53H8.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF53H8.1; CE35723; WBGene00000164; apm-3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ20736.
PRIDEiQ20736.

Expressioni

Gene expression databases

BgeeiWBGene00000164.

Interactioni

Protein-protein interaction databases

STRINGi6239.F53H8.1.

Structurei

3D structure databases

ProteinModelPortaliQ20736.
SMRiQ20736. Positions 3-414.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini176 – 413238MHD (mu homology)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the adaptor complexes medium subunit family.SAAS annotation
Contains MHD (mu homology) domain.SAAS annotation

Phylogenomic databases

eggNOGiKOG2740. Eukaryota.
ENOG410XT7B. LUCA.
GeneTreeiENSGT00530000062779.
HOGENOMiHOG000234366.
InParanoidiQ20736.
KOiK12398.
OMAiEDYFSEC.
OrthoDBiEOG091G088V.
PhylomeDBiQ20736.

Family and domain databases

InterProiIPR022775. AP_mu_sigma_su.
IPR001392. Clathrin_mu.
IPR018240. Clathrin_mu_CS.
IPR011012. Longin-like_dom.
IPR028565. MHD.
[Graphical view]
PfamiPF00928. Adap_comp_sub. 1 hit.
PF01217. Clat_adaptor_s. 1 hit.
[Graphical view]
PIRSFiPIRSF005992. Clathrin_mu. 1 hit.
PRINTSiPR00314. CLATHRINADPT.
SUPFAMiSSF49447. SSF49447. 1 hit.
SSF64356. SSF64356. 1 hit.
PROSITEiPS00990. CLAT_ADAPTOR_M_1. 1 hit.
PS51072. MHD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q20736-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNSLFFVNS SGDVLLEKHW KSVIHRSICD YFFDIQKKSI HPEDVPPIIS
60 70 80 90 100
TPHHYLINVY QNNLFLVAVI TVETPPLMVI EFLHRVIQTF TQYFDEFSDS
110 120 130 140 150
SMKENCVMVF ELLDEMLDNG FPLVTEMNIL QDLIKPPNFL RNIANQVTGR
160 170 180 190 200
TNLSETLPTG QLSNIPWRRQ GVKYTNNEAY FDVIEEIDVI VDKQGSTVFA
210 220 230 240 250
EIQGYVDVCC KLSGMPDLTM TLINPRLLDD VSFHPCVRYK RWENEKVLSF
260 270 280 290 300
VPPDGNFRLL SYHIAAQNMV AIPIYVRQVI SLKPNAGKLD LTVGPKLSMG
310 320 330 340 350
KVLEDVVLEI TMPKCVQNCN LVASHGRIAF DPTTKLLQWT IGKIEVGKPS
360 370 380 390 400
TLKGSVAVSG TTVAENPPIS LKFKINQLVL SGLKVNRLDM YGEKYKPFKG
410
VKYITKAGKF TIRT
Length:414
Mass (Da):46,892
Last modified:March 1, 2004 - v2
Checksum:i9BA21143D97C0341
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD67241.1.
PIRiT34298.
RefSeqiNP_508184.2. NM_075783.5.
UniGeneiCel.897.

Genome annotation databases

EnsemblMetazoaiF53H8.1; F53H8.1; WBGene00000164.
GeneIDi186194.
KEGGicel:CELE_F53H8.1.
UCSCiF53H8.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD67241.1.
PIRiT34298.
RefSeqiNP_508184.2. NM_075783.5.
UniGeneiCel.897.

3D structure databases

ProteinModelPortaliQ20736.
SMRiQ20736. Positions 3-414.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F53H8.1.

Proteomic databases

PaxDbiQ20736.
PRIDEiQ20736.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF53H8.1; F53H8.1; WBGene00000164.
GeneIDi186194.
KEGGicel:CELE_F53H8.1.
UCSCiF53H8.1. c. elegans.

Organism-specific databases

CTDi186194.
WormBaseiF53H8.1; CE35723; WBGene00000164; apm-3.

Phylogenomic databases

eggNOGiKOG2740. Eukaryota.
ENOG410XT7B. LUCA.
GeneTreeiENSGT00530000062779.
HOGENOMiHOG000234366.
InParanoidiQ20736.
KOiK12398.
OMAiEDYFSEC.
OrthoDBiEOG091G088V.
PhylomeDBiQ20736.

Enzyme and pathway databases

SignaLinkiQ20736.

Gene expression databases

BgeeiWBGene00000164.

Family and domain databases

InterProiIPR022775. AP_mu_sigma_su.
IPR001392. Clathrin_mu.
IPR018240. Clathrin_mu_CS.
IPR011012. Longin-like_dom.
IPR028565. MHD.
[Graphical view]
PfamiPF00928. Adap_comp_sub. 1 hit.
PF01217. Clat_adaptor_s. 1 hit.
[Graphical view]
PIRSFiPIRSF005992. Clathrin_mu. 1 hit.
PRINTSiPR00314. CLATHRINADPT.
SUPFAMiSSF49447. SSF49447. 1 hit.
SSF64356. SSF64356. 1 hit.
PROSITEiPS00990. CLAT_ADAPTOR_M_1. 1 hit.
PS51072. MHD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ20736_CAEEL
AccessioniPrimary (citable) accession number: Q20736
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: March 1, 2004
Last modified: September 7, 2016
This is version 121 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.