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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • determination of adult lifespan Source: WormBase
  • response to heat Source: WormBase
  • response to UV Source: WormBase

Enzyme and pathway databases

ReactomeiR-CEL-6798695. Neutrophil degranulation.

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-1Imported
ORF Names:CELE_F49E11.9Imported, F49E11.9Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiF49E11.9; CE05905; WBGene00004742; scl-1.

PTM / Processingi

Proteomic databases

PaxDbiQ20608.

Expressioni

Gene expression databases

BgeeiWBGene00004742.

Interactioni

Protein-protein interaction databases

STRINGi6239.F49E11.9.

Structurei

3D structure databases

ProteinModelPortaliQ20608.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 180SCPInterPro annotationAdd BLAST162

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
GeneTreeiENSGT00760000119004.
HOGENOMiHOG000036879.
InParanoidiQ20608.
OMAiEKCKATC.
OrthoDBiEOG091G0JZR.
PhylomeDBiQ20608.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiView protein in InterPro
IPR001283. Allrgn_V5/Tpx1.
IPR014044. CAP_domain.
IPR002413. V5_allergen.
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiView protein in Pfam
PF00188. CAP. 1 hit.
PRINTSiPR00838. V5ALLERGEN.
PR00837. V5TPXLIKE.
SMARTiView protein in SMART
SM00198. SCP. 1 hit.
SUPFAMiSSF55797. SSF55797. 1 hit.

Sequencei

Sequence statusi: Complete.

Q20608-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYFILCLLAI GVNAQFTSTG QSSIVDAHNK LRSAIAKSTY VAKGTKKEPA
60 70 80 90 100
TDMRKMVVDS TVAASAQNYA NTCPTGHSKG TGYGENLYWS WTSADVGSLD
110 120 130 140 150
SYGEIAAAAW EKEFQDFGWK SNAMDTTLFN SGIGHATQMA WANTSSIGCG
160 170 180 190 200
VKNCGRDASM RNMNKIAVVC QYSPPGNTMG RPIYKEGTTC SSCSGSTKCD

TASGLCG
Length:207
Mass (Da):21,933
Last modified:November 1, 1996 - v1
Checksum:i5D6F6E96794B4C1A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94348.1.
PIRiT22436.
RefSeqiNP_502502.1. NM_070101.1.
UniGeneiCel.26917.

Genome annotation databases

EnsemblMetazoaiF49E11.9; F49E11.9; WBGene00004742.
GeneIDi186053.
KEGGicel:CELE_F49E11.9.
UCSCiF49E11.9. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ20608_CAEEL
AccessioniPrimary (citable) accession number: Q20608
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 30, 2017
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported