Unreviewed, UniProtKB/TrEMBL Q20455 (Q20455_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein F58E6.10, partially confirmed by transcript evidence EMBL CAA94830.3

Gene names

Name:	unc-42 WormBase WBGene00006778
ORF Names:	F58E6.10 EMBL CAA94830.3 WormBase WBGene00006778 WormPep F58E6.10

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	264 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Subcellular location

Nucleus By similarity. RuleBase RU000682V4

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU000682V4
Domain	Homeobox RuleBase RU000682V4
Ligand	DNA-binding RuleBase RU000682V4
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	locomotion Inferred from mutant phenotype. Source: WormBase regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q20455-1 [UniParc]. Last modified November 22, 2005. Version 4. Checksum: 11E9D3145651DC61	FASTA	264	29,362
	10 20 30 40 50 60 MSDNLLNGAN GASTVSQFQE KVKDLGVSLH DFTAYYPSSL DTVSASLRPI SDPSSDGAFK 70 80 90 100 110 120 KIKTEGLGGS VFGSSIAGVT NTPARRRHRT TFTQEQLQEL DAAFQKSHYP DIYVREELAR 130 140 150 160 170 180 ITKLNEARIQ VWFQNRRAKH RKHEKQLNKA INPPHSFLSN PANTLMRQGM YPAALNRDGF 190 200 210 220 230 240 WYQSYQRPMP YPTASPSYSN SFTNPIANFG HSITSFQADD EFYQKSLALR MTTTPSAATA 250 260 ATSLANINYQ QTQPSEASTN PPSI

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z70754, Z70780 Genomic DNA. Translation: CAA94780.3. Z70780, Z70754 Genomic DNA. Translation: CAA94830.3.
PIR	T22296.
RefSeq	NP_505519.3.
UniGene	Cel.2067
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:26546N.
IntAct	Q20455. 1 interaction.
Genome annotation databases
Ensembl	F58E6.10. Caenorhabditis elegans. [Contig view]
GeneID	192081.
KEGG	cel:F58E6.10.
Organism-specific databases
WormBase	WBGene00006778. unc-42.
WormPep	F58E6.10. CE39164. [WorfDB]
Phylogenomic databases
OMA	Q20455. SSDGAFK.
Gene expression databases
ArrayExpress	Q20455.
Family and domain databases
InterPro	IPR001356. Homeobox. IPR017970. Homeobox_CS. IPR012287. Homeodomain-rel. [Graphical view]
Gene3D	G3DSA:1.10.10.60. Homeodomain-rel. 1 hit.
Pfam	PF00046. Homeobox. 1 hit. [Graphical view]
ProDom	PD000010. Homeobox. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00389. HOX. 1 hit. [Graphical view]
PROSITE	PS00027. HOMEOBOX_1. 1 hit. PS50071. HOMEOBOX_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	951506.

Entry information

Entry name

Q20455_CAEEL

Accession

Primary (citable) accession number: Q20455
Secondary accession number(s): Q20986

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 22, 2005
Last modified:	June 16, 2009
This is version 82 of the entry and version 4 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)