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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F46B6.6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F46B6.6Imported, F46B6.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF46B6.6a; CE26974; WBGene00009771.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiQ20447.
PaxDbiQ20447.
PRIDEiQ20447.

Interactioni

Protein-protein interaction databases

STRINGi6239.F46B6.6a.

Structurei

3D structure databases

ProteinModelPortaliQ20447.
SMRiQ20447. Positions 136-408.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini154 – 324171Tr-type G (guanine nucleotide-binding)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1145. Eukaryota.
COG0532. LUCA.
GeneTreeiENSGT00550000074932.
HOGENOMiHOG000076906.
InParanoidiQ20447.
KOiK02519.
OMAiKVVEVWI.
OrthoDBiEOG776SPH.
PhylomeDBiQ20447.

Family and domain databases

Gene3Di3.40.50.10050. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR023115. TIF_IF2_dom3.
IPR009000. Transl_B-barrel.
[Graphical view]
PfamiPF11987. IF-2. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 2 hits.
SSF52156. SSF52156. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51722. G_TR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q20447-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKTMILQLL RTATSRQLLR CSQVQTTTTF WRIQTQQFAS EGKRGRRKFV
60 70 80 90 100
EAAVVKSTKS TKQTVDVWKQ MNPSELAAAL SVDLSEITEF LESLDRRNVD
110 120 130 140 150
AIISDSPLDD VSILQTTAAF SFKPRFVNGP PKKTEKEDAD LHPQLEASPK
160 170 180 190 200
DLERRPPIVT IMGHVDHGKT TLLDAMRNSQ IAAGEFGGIT QHIGAFSVEL
210 220 230 240 250
TKGRRVTFLD TPGHAAFASM RARGAKGADI VVLVVAADDG VKEQTAQSIK
260 270 280 290 300
FAKDANVQLV VAVNKIDKPN ADPMRAMRSL LEHDVVVEQL GGDVQCVEVS
310 320 330 340 350
ALQSRNLPSL QDALLLQADV MDLKATKKGK VEAVIIESSV VHGIGKVCTL
360 370 380 390 400
VVSRGTLKKG CVLVAGSSWC RVKTMHDENG KIVQVATPSQ PVRVSGWKDD
410 420 430 440 450
LPTPGDLVLE AETVDRAQKA VNLRIDNMMR EKADRDWEDT KDQRDKARET
460 470 480 490 500
YLSNRQQLLD RGQRFGSTLR NIVHKKQRIE KDVADGSPKF RLIIRTDVEG
510 520 530 540 550
TLEAILEILS TYKSEQCKLQ LVDFEVGPPT EKDIELAKET DATIYTFNVE
560 570 580 590 600
TSAKLKQRAD AAGIQIDSFN VIYRMIESLK GELSARIPKL TELHLVGEGH
610 620 630 640 650
VLKEFVISDR GRKRQPIAGT LVNWGNFDRH CIYKFTRGNQ VVYEGEVETM
660 670 680 690 700
KAGMEVVTNA KTNTEVGLAL SDKNIRFKED DQVEAYEKRT ITQEVDWYPP

GF
Length:702
Mass (Da):78,134
Last modified:June 1, 2001 - v2
Checksum:i79432D417AE2F8C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA94822.2.
PIRiT22288.
RefSeqiNP_001023936.1. NM_001028765.3.
UniGeneiCel.3550.

Genome annotation databases

EnsemblMetazoaiF46B6.6a; F46B6.6a; WBGene00009771.
GeneIDi179374.
KEGGicel:CELE_F46B6.6.
UCSCiF46B6.6a. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA94822.2.
PIRiT22288.
RefSeqiNP_001023936.1. NM_001028765.3.
UniGeneiCel.3550.

3D structure databases

ProteinModelPortaliQ20447.
SMRiQ20447. Positions 136-408.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F46B6.6a.

Proteomic databases

EPDiQ20447.
PaxDbiQ20447.
PRIDEiQ20447.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF46B6.6a; F46B6.6a; WBGene00009771.
GeneIDi179374.
KEGGicel:CELE_F46B6.6.
UCSCiF46B6.6a. c. elegans.

Organism-specific databases

CTDi179374.
WormBaseiF46B6.6a; CE26974; WBGene00009771.

Phylogenomic databases

eggNOGiKOG1145. Eukaryota.
COG0532. LUCA.
GeneTreeiENSGT00550000074932.
HOGENOMiHOG000076906.
InParanoidiQ20447.
KOiK02519.
OMAiKVVEVWI.
OrthoDBiEOG776SPH.
PhylomeDBiQ20447.

Family and domain databases

Gene3Di3.40.50.10050. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR023115. TIF_IF2_dom3.
IPR009000. Transl_B-barrel.
[Graphical view]
PfamiPF11987. IF-2. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 2 hits.
SSF52156. SSF52156. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51722. G_TR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ20447_CAEEL
AccessioniPrimary (citable) accession number: Q20447
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 1, 2001
Last modified: July 6, 2016
This is version 136 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.