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Protein
Submitted name:

Fatty Acid CoA Synthetase family

Gene

acs-11

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-75876. Synthesis of very long-chain fatty acyl-CoAs.

Names & Taxonomyi

Protein namesi
Submitted name:
Fatty Acid CoA Synthetase familyImported
Gene namesi
Name:acs-11Imported
ORF Names:CELE_F41C3.3Imported, F41C3.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF41C3.3; CE32658; WBGene00018269; acs-11.

PTM / Processingi

Proteomic databases

EPDiQ20264.
PaxDbiQ20264.

Interactioni

Protein-protein interaction databases

STRINGi6239.F41C3.3.1.

Structurei

3D structure databases

ProteinModelPortaliQ20264.
SMRiQ20264. Positions 23-501.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 403375AMP-bindingInterPro annotationAdd
BLAST
Domaini412 – 48776AMP-binding_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1176. Eukaryota.
COG0318. LUCA.
GeneTreeiENSGT00760000119304.
HOGENOMiHOG000229983.
InParanoidiQ20264.
OMAiARFKQPR.
PhylomeDBiQ20264.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q20264-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSRLVSSVH PQIGLRAASS AANNIVSQAQ LQSDPSKLLF IDGDRKTTYG
60 70 80 90 100
EFVKRTGQYA TALTEKYNIK KGDRVMARVS KTTDTAALYI ACLQIGALYI
110 120 130 140 150
PVNPGYTESE AAHYIKDATP SILVSCNEEL DKVFRDKIRV INEDKLASEA
160 170 180 190 200
GSLNACTMIE HVEKSDPASV CYTSGTTGLP KGAILTHGSL SNNAHDIVRD
210 220 230 240 250
WGFTGNDYNL HALPFYHVHG LYYSLHCSLF SHSTMIWRSK FEVEDCIKYM
260 270 280 290 300
KNATVMMGVP TFFSRLLASK NFNKEAFGNV RVFISGSAPL SVSTIEEFRE
310 320 330 340 350
RTGQVILERY GMTEAGVMTT NPLNGERKAG TVGPAVQGVG CRIAKNGGIE
360 370 380 390 400
VKTNAIFAGY WKNPKKTAEE FTEDGWFKTG DVGHLDEDGY LTIGGRSKDM
410 420 430 440 450
VITGGLNVYP KELEDFIDTL PFVKESAVIA SPHPDFGEAV VAIVVPSEKV
460 470 480 490 500
TDEKEFEKKL IGIMKKKVAN YKVPKRVIVL DDLPRNHITK VQKNVLRDTY

KNLFA
Length:505
Mass (Da):55,736
Last modified:March 1, 2003 - v3
Checksum:iB23B44DC6E8185BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD65859.1.
PIRiT16318.
RefSeqiNP_494848.3. NM_062447.7.
UniGeneiCel.17850.

Genome annotation databases

EnsemblMetazoaiF41C3.3.1; F41C3.3.1; WBGene00018269.
F41C3.3.2; F41C3.3.2; WBGene00018269.
GeneIDi173820.
KEGGicel:CELE_F41C3.3.
UCSCiF41C3.3.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD65859.1.
PIRiT16318.
RefSeqiNP_494848.3. NM_062447.7.
UniGeneiCel.17850.

3D structure databases

ProteinModelPortaliQ20264.
SMRiQ20264. Positions 23-501.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F41C3.3.1.

Proteomic databases

EPDiQ20264.
PaxDbiQ20264.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF41C3.3.1; F41C3.3.1; WBGene00018269.
F41C3.3.2; F41C3.3.2; WBGene00018269.
GeneIDi173820.
KEGGicel:CELE_F41C3.3.
UCSCiF41C3.3.2. c. elegans.

Organism-specific databases

CTDi173820.
WormBaseiF41C3.3; CE32658; WBGene00018269; acs-11.

Phylogenomic databases

eggNOGiKOG1176. Eukaryota.
COG0318. LUCA.
GeneTreeiENSGT00760000119304.
HOGENOMiHOG000229983.
InParanoidiQ20264.
OMAiARFKQPR.
PhylomeDBiQ20264.

Enzyme and pathway databases

ReactomeiR-CEL-75876. Synthesis of very long-chain fatty acyl-CoAs.

Miscellaneous databases

NextBioi881255.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ20264_CAEEL
AccessioniPrimary (citable) accession number: Q20264
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: March 1, 2003
Last modified: March 16, 2016
This is version 102 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.