Q20084 (Q20084_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein EXC-7 EMBL CAA85327.1

Gene names

Name:	exc-7 WormBase F35H8.5
ORF Names:	F35H8.5 EMBL CAA85327.1

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	456 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	epithelial cell development Inferred from mutant phenotype. Source: WormBase regulation of tube size Inferred from mutant phenotype. Source: WormBase
Cellular component	nuclear speck Inferred from direct assay. Source: WormBase
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q20084 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 8E9D63C5526E6297	FASTA	456	48,703
	10 20 30 40 50 60 MTMEALLTPN NNNVPTSPVQ TTYTSTQRYC SAPNVDIGES KTNLIINYLP QGMTQEEVRS 70 80 90 100 110 120 LFTSIGEIES CKLVRDKVTG QSLGYGFVNY VREEDALRAV SSFNGLRLQN KTIKVSYARP 130 140 150 160 170 180 SNDQIKGSNL YVSGIPKSMT LHELESIFRP FGQIITSRIL SDNVTGLSKG VGFVRFDKKD 190 200 210 220 230 240 EADVAIKTLN GSIPSGCSEQ ITVKFANNPA SNNPKGLLSD LEAVQQAATT LVPLSTILGA 250 260 270 280 290 300 PTLRATAGGI GPMHHAPITS KYRYSPMGAI TAVSQPTATL PADYLTTSAL LQMSQLNALA 310 320 330 340 350 360 GLNPFATATA VPDFTASLIA HQQQQHAVAQ QHAAQTASPP ATNGQVAGLA AHAQLSALSA 370 380 390 400 410 420 SVAATLPPSD TAGYCLFVYN LSSDTDDTLL WQLFSQFGAI VNVKILRDLT QQCKGYAFVS 430 440 450 MSNYTEAYNA MLSLNGTNLA GKTLQVVFKS STPYRA

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z36752 Genomic DNA. Translation: CAA85327.1.
PIR	T21822.
RefSeq	NP_496057.1. NM_063656.3.
UniGene	Cel.5876.
3D structure databases
HSSP	HSSP built from PDB template 1FXL based on UniProtKB P26378.
ProteinModelPortal	Q20084.
SMR	Q20084. Positions 40-206, 372-455.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-27011N.
IntAct	Q20084. 13 interactions.
MINT	MINT-1038844.
STRING	Q20084.
Proteomic databases
PRIDE	Q20084.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	F35H8.5; F35H8.5; F35H8.5.
GeneID	174506.
KEGG	cel:F35H8.5.
NMPDR	fig|6239.3.peg.6960.
Organism-specific databases
CTD	174506.
WormBase	F35H8.5; CE00983; WBGene00001368; exc-7.
Phylogenomic databases
eggNOG	meNOG07225.
GeneTree	EMGT00050000000040.
HOGENOM	HBG756718.
InParanoid	Q20084.
OMA	NLNGQKP.
PhylomeDB	Q20084.
Gene expression databases
ArrayExpress	Q20084.
Family and domain databases
InterPro	IPR006548. ELAD_HUD_SF. IPR002343. Hud_Sxl_RNA. IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 3 hits.
Pfam	PF00076. RRM_1. 3 hits. [Graphical view]
PRINTS	PR00961. HUDSXLRNA.
SMART	SM00360. RRM. 3 hits. [Graphical view]
TIGRFAMs	TIGR01661. ELAV_HUD_SF. 1 hit.
PROSITE	PS50102. RRM. 3 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	884320.

Entry information

Entry name

Q20084_CAEEL

Accession

Primary (citable) accession number: Q20084

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	January 25, 2012
This is version 92 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)