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Protein
Submitted name:

DeHydrogenases, Short chain

Gene

dhs-20

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-5365859. RA biosynthesis pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
DeHydrogenases, Short chainImported
Gene namesi
Name:dhs-20Imported
ORF Names:CELE_F35B12.2Imported, F35B12.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF35B12.2; CE39496; WBGene00000983; dhs-20.

PTM / Processingi

Proteomic databases

EPDiQ20012.
PaxDbiQ20012.
PRIDEiQ20012.

Interactioni

Protein-protein interaction databases

STRINGi6239.F35B12.2.

Structurei

3D structure databases

ProteinModelPortaliQ20012.
SMRiQ20012. Positions 42-297.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1610. Eukaryota.
ENOG410Y7FK. LUCA.
GeneTreeiENSGT00840000129713.
InParanoidiQ20012.
OMAiYISMSTT.
OrthoDBiEOG7FXZZX.
PhylomeDBiQ20012.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 2 hits.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q20012-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVCCLCTLF TWVLYFVAVV VVWNIVRYIL ELIPEGGSLQ DRAILITGCD
60 70 80 90 100
TGFGRELAKK CAKNGFLVFA GCLTTEAAKT LESESANPRL RTVPLDVSKD
110 120 130 140 150
ESVEKTVEFV KKSLGNHKLW GVVNNAGIFS CYGPDDWCRM NDYKLALDVN
160 170 180 190 200
CLGVIRVTQA FKKLVKAAKG RIVTVTSVNG RLSTPAAGPY VVSKFGAAAY
210 220 230 240 250
MDCIRQELYN FGVKVSILEP GIFRTPLLDE QAMLKRVDHV WTQIDDETRT
260 270 280 290 300
EYGETFKNYF AKMWNKTYIS MSTTKIHYVV DNYYHALTAK YPRHRYYCGW
310 320 330 340
DAIFVYVPLS LLPTWWADYV IRSLGKQEVV PACLEDSMKK KN
Length:342
Mass (Da):38,728
Last modified:January 24, 2006 - v3
Checksum:iC85A39B2266F7AB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA98465.3.
PIRiT21734.
RefSeqiNP_505941.3. NM_073540.5.
UniGeneiCel.3765.

Genome annotation databases

EnsemblMetazoaiF35B12.2; F35B12.2; WBGene00000983.
GeneIDi179590.
KEGGicel:CELE_F35B12.2.
UCSCiF35B12.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA98465.3.
PIRiT21734.
RefSeqiNP_505941.3. NM_073540.5.
UniGeneiCel.3765.

3D structure databases

ProteinModelPortaliQ20012.
SMRiQ20012. Positions 42-297.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F35B12.2.

Proteomic databases

EPDiQ20012.
PaxDbiQ20012.
PRIDEiQ20012.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF35B12.2; F35B12.2; WBGene00000983.
GeneIDi179590.
KEGGicel:CELE_F35B12.2.
UCSCiF35B12.2. c. elegans.

Organism-specific databases

CTDi179590.
WormBaseiF35B12.2; CE39496; WBGene00000983; dhs-20.

Phylogenomic databases

eggNOGiKOG1610. Eukaryota.
ENOG410Y7FK. LUCA.
GeneTreeiENSGT00840000129713.
InParanoidiQ20012.
OMAiYISMSTT.
OrthoDBiEOG7FXZZX.
PhylomeDBiQ20012.

Enzyme and pathway databases

ReactomeiR-CEL-5365859. RA biosynthesis pathway.

Miscellaneous databases

NextBioi906062.
PROiQ20012.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 2 hits.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ20012_CAEEL
AccessioniPrimary (citable) accession number: Q20012
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: January 24, 2006
Last modified: May 11, 2016
This is version 116 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.