Afp - Microbacterium arborescens

Preferred order of sections

Names and origin

Protein names

Gene names

Name:	afp EMBL AAZ06850.1
ORF Names:	mas0001 EMBL AAZ06850.1

Organism

Microbacterium arborescens EMBL AAZ06850.1

Taxonomic identifier

33883 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Microbacterium

Protein attributes

Sequence length	161 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the dps family. RuleBase RU003875

Ontologies

Keywords
Ligand	Iron PDB 2YJJ PDB 2YJK Metal-binding PDB 2YJJ PDB 2YJK
Technical term	3D-structure PDB 2YJJ PDB 2YJK
Gene Ontology (GO)
Biological_process	cellular iron ion homeostasis Inferred from electronic annotation. Source: InterPro response to stress Inferred from electronic annotation. Source: InterPro
Molecular_function	ferric iron binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

2 – 161

160

Afp EMBL AAZ06850.1

PRO_5000095898

Sites

Metal binding

70

1

Iron PDB 2YJJ PDB 2YJK

Metal binding

74

1

Iron PDB 2YJJ PDB 2YJK

Sequences

Sequence

Length

Mass (Da)

Tools

Q1X6M4 [UniParc].

Last modified May 2, 2006. Version 1.
Checksum: 86558981530D167F
Show »

FASTA

161

17,269

        10         20         30         40         50         60 
MTDTNITTPA LTADPEVAAA AAQFLTPVVH KMQALVVNGK QAHWNVRGSN FIAIHELLDS 

        70         80         90        100        110        120 
VVAHAQDYAD TAAERIVALG LPIDSRVSTM AEKTSTAVPA GFAQWQDEIK AIVSDIDAAL 

       130        140        150        160 
VDLQAAIDGL DEVDLTSQDV AIEIKRGVDK DRWFLLAHLA E

« Hide

References

[1]	"A novel Dps-type protein from insect gut bacteria catalyses hydrolysis and synthesis of N-acyl amino acids." Ping L., Buchler R., Mithofer A., Svatos A., Spiteller D., Dettner K., Gmeiner S., Piel J., Schlott B., Boland W. Environ. Microbiol. 9:1572-1583(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: SE 14 EMBL AAZ06850.1.
[2]	"Structure and mechanism of iron translocation by a Dps protein from Microbacterium arborescens." Pesek J., Buchler R., Albrecht R., Boland W., Zeth K. J. Biol. Chem. 286:34872-34882(2011) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) IN COMPLEX WITH IRON.
[3]	"Coevolution of aah: A dps-Like Gene with the Host Bacterium Revealed by Comparative Genomic Analysis." Ping L., Platzer M., Wen G., Delaroque N. ScientificWorldJournal 2012:504905-504905(2012) Cited for: NUCLEOTIDE SEQUENCE. Strain: SE 14 EMBL AAZ06850.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AY993941 Genomic DNA. Translation: AAZ06850.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2YJJ	X-ray	2.05	A/B/C/D/E/F/G/H/I/J/K/L	1-161	[»]
2YJK	X-ray	2.00	A/B/C/D/E/F/G/H/I/J/K/L	1-161	[»]

ProteinModelPortal

Q1X6M4.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

Gene3D

1.20.1260.10. 1 hit.

InterPro

IPR002177. DPS_DNA-bd.
IPR009078. Ferritin-like_SF.
IPR012347. Ferritin-rel.
IPR008331. Ferritin_DPS_dom.
[Graphical view]

Pfam

PF00210. Ferritin. 1 hit.
[Graphical view]

PIRSF

PIRSF005900. Dps. 1 hit.

PRINTS

PR01346. HELNAPAPROT.

SUPFAM

SSF47240. Ferritin/RR_like. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q1X6M4_9MICO

Accession

Primary (citable) accession number: Q1X6M4

Entry history

Integrated into UniProtKB/TrEMBL:	May 2, 2006
Last sequence update:	May 2, 2006
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)