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Q1WUJ1

- Q1WUJ1_LACS1

UniProt

Q1WUJ1 - Q1WUJ1_LACS1

Protein

Exodeoxyribonuclease 7 small subunit

Gene

xseB

Organism
Lactobacillus salivarius (strain UCC118)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotationSAAS annotation

    Catalytic activityi

    Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation
    Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates.SAAS annotation

    GO - Molecular functioni

    1. exodeoxyribonuclease VII activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    ExonucleaseUniRule annotationSAAS annotation, Hydrolase, Nuclease

    Enzyme and pathway databases

    BioCyciLSAL362948:GJDJ-604-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
    Alternative name(s):
    Exodeoxyribonuclease VII small subunitUniRule annotation
    Gene namesi
    Name:xseBUniRule annotationImported
    Ordered Locus Names:LSL_0535Imported
    OrganismiLactobacillus salivarius (strain UCC118)Imported
    Taxonomic identifieri362948 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000006559: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. exodeoxyribonuclease VII complex Source: InterPro

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Heterooligomer composed of large and small subunits.UniRule annotationSAAS annotation

    Protein-protein interaction databases

    STRINGi362948.LSL_0535.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1WUJ1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the XseB family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1722.
    HOGENOMiHOG000228798.
    KOiK03602.
    OMAiVEKQMEY.
    OrthoDBiEOG69KV31.

    Family and domain databases

    Gene3Di1.10.287.1040. 1 hit.
    HAMAPiMF_00337. Exonuc_7_S.
    InterProiIPR003761. Exonuc_VII_S.
    [Graphical view]
    PfamiPF02609. Exonuc_VII_S. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomiPD028235. Exonuc_VII_S. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    TIGRFAMsiTIGR01280. xseB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1WUJ1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEKVTFEQD MKNLEEIVKR LEQGDIPLEE AIEKFKQGMD LSKKLQNTLL   50
    QAEETLTKVI DDNGDEQLFE KENED 75
    Length:75
    Mass (Da):8,743
    Last modified:May 2, 2006 - v1
    Checksum:iF38FC14B9206E8A1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000233 Genomic DNA. Translation: ABD99344.1.
    RefSeqiYP_535427.1. NC_007929.1.

    Genome annotation databases

    EnsemblBacteriaiABD99344; ABD99344; LSL_0535.
    GeneIDi3976493.
    KEGGilsl:LSL_0535.
    PATRICi22277973. VBILacSal43464_0613.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000233 Genomic DNA. Translation: ABD99344.1 .
    RefSeqi YP_535427.1. NC_007929.1.

    3D structure databases

    ProteinModelPortali Q1WUJ1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 362948.LSL_0535.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD99344 ; ABD99344 ; LSL_0535 .
    GeneIDi 3976493.
    KEGGi lsl:LSL_0535.
    PATRICi 22277973. VBILacSal43464_0613.

    Phylogenomic databases

    eggNOGi COG1722.
    HOGENOMi HOG000228798.
    KOi K03602.
    OMAi VEKQMEY.
    OrthoDBi EOG69KV31.

    Enzyme and pathway databases

    BioCyci LSAL362948:GJDJ-604-MONOMER.

    Family and domain databases

    Gene3Di 1.10.287.1040. 1 hit.
    HAMAPi MF_00337. Exonuc_7_S.
    InterProi IPR003761. Exonuc_VII_S.
    [Graphical view ]
    Pfami PF02609. Exonuc_VII_S. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomi PD028235. Exonuc_VII_S. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    TIGRFAMsi TIGR01280. xseB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: UCC118Imported.

    Entry informationi

    Entry nameiQ1WUJ1_LACS1
    AccessioniPrimary (citable) accession number: Q1WUJ1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 2, 2006
    Last sequence update: May 2, 2006
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3