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Protein

Exodeoxyribonuclease 7 small subunit

Gene

xseB

Organism
Lactobacillus salivarius (strain UCC118)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotationSAAS annotation

Catalytic activityi

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionExonucleaseUniRule annotationSAAS annotation, Hydrolase, Nuclease

Names & Taxonomyi

Protein namesi
Recommended name:
Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
Alternative name(s):
Exodeoxyribonuclease VII small subunitUniRule annotation
Short name:
Exonuclease VII small subunitUniRule annotation
Gene namesi
Name:xseBUniRule annotationImported
Ordered Locus Names:LSL_0535Imported
OrganismiLactobacillus salivarius (strain UCC118)Imported
Taxonomic identifieri362948 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000006559 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Heterooligomer composed of large and small subunits.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi362948.LSL_0535.

Structurei

3D structure databases

ProteinModelPortaliQ1WUJ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the XseB family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG41067QG. Bacteria.
COG1722. LUCA.
HOGENOMiHOG000228798.
KOiK03602.
OMAiMNDESSP.
OrthoDBiPOG091H02EJ.

Family and domain databases

Gene3Di1.10.287.1040. 1 hit.
HAMAPiMF_00337. Exonuc_7_S. 1 hit.
InterProiView protein in InterPro
IPR003761. Exonuc_VII_S.
PANTHERiPTHR34137. PTHR34137. 1 hit.
PfamiView protein in Pfam
PF02609. Exonuc_VII_S. 1 hit.
PIRSFiPIRSF006488. Exonuc_VII_S. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD028235. Exonuc_VII_S. 1 hit.
TIGRFAMsiTIGR01280. xseB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1WUJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEKVTFEQD MKNLEEIVKR LEQGDIPLEE AIEKFKQGMD LSKKLQNTLL
60 70
QAEETLTKVI DDNGDEQLFE KENED
Length:75
Mass (Da):8,743
Last modified:May 2, 2006 - v1
Checksum:iF38FC14B9206E8A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000233 Genomic DNA. Translation: ABD99344.1.
RefSeqiWP_003699848.1. NC_007929.1.
YP_535427.1. NC_007929.1.

Genome annotation databases

EnsemblBacteriaiABD99344; ABD99344; LSL_0535.
GeneIDi3976493.
KEGGilsl:LSL_0535.
PATRICifig|362948.14.peg.613.

Similar proteinsi

Entry informationi

Entry nameiQ1WUJ1_LACS1
AccessioniPrimary (citable) accession number: Q1WUJ1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 2, 2006
Last sequence update: May 2, 2006
Last modified: September 27, 2017
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported