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Q1WUJ1 (Q1WUJ1_LACS1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Exodeoxyribonuclease 7 small subunit HAMAP-Rule MF_00337

EC=3.1.11.6 HAMAP-Rule MF_00337
Alternative name(s):
Exodeoxyribonuclease VII small subunit HAMAP-Rule MF_00337
Gene names
Name:xseB HAMAP-Rule MF_00337 EMBL ABD99344.1
Ordered Locus Names:LSL_0535 EMBL ABD99344.1
OrganismLactobacillus salivarius (strain UCC118) [Complete proteome] [HAMAP] EMBL ABD99344.1
Taxonomic identifier362948 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length75 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity. HAMAP-Rule MF_00337 SAAS SAAS003761

Catalytic activity

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates. HAMAP-Rule MF_00337

Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates. SAAS SAAS003761

Subunit structure

Heterooligomer composed of large and small subunits By similarity. HAMAP-Rule MF_00337 SAAS SAAS003761

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00337 SAAS SAAS003761.

Sequence similarities

Belongs to the XseB family. HAMAP-Rule MF_00337

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q1WUJ1 [UniParc].

Last modified May 2, 2006. Version 1.
Checksum: F38FC14B9206E8A1

FASTA758,743
        10         20         30         40         50         60 
MAEKVTFEQD MKNLEEIVKR LEQGDIPLEE AIEKFKQGMD LSKKLQNTLL QAEETLTKVI 

        70 
DDNGDEQLFE KENED 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000233 Genomic DNA. Translation: ABD99344.1.
RefSeqYP_535427.1. NC_007929.1.

3D structure databases

ProteinModelPortalQ1WUJ1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING362948.LSL_0535.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD99344; ABD99344; LSL_0535.
GeneID3976493.
KEGGlsl:LSL_0535.
PATRIC22277973. VBILacSal43464_0613.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1722.
HOGENOMHOG000228798.
KOK03602.
OMALCHDKLQ.
OrthoDBEOG69KV31.

Enzyme and pathway databases

BioCycLSAL362948:GJDJ-604-MONOMER.

Family and domain databases

Gene3D1.10.287.1040. 1 hit.
HAMAPMF_00337. Exonuc_7_S.
InterProIPR003761. Exonuc_VII_S.
[Graphical view]
PfamPF02609. Exonuc_VII_S. 1 hit.
[Graphical view]
PIRSFPIRSF006488. Exonuc_VII_S. 1 hit.
ProDomPD028235. Exonuc_VII_S. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR01280. xseB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1WUJ1_LACS1
AccessionPrimary (citable) accession number: Q1WUJ1
Entry history
Integrated into UniProtKB/TrEMBL: May 2, 2006
Last sequence update: May 2, 2006
Last modified: April 16, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)