Q1WSN3 (Q1WSN3_LACS1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase EMBL ABE00096.1
EC=3.2.1.1 EMBL ABE00096.1

Gene names

Name:	amyA EMBL ABE00096.1
Ordered Locus Names:	LSL_1289

Organism

Lactobacillus salivarius (strain UCC118) [Complete proteome] [HAMAP] EMBL ABE00096.1

Taxonomic identifier

362948 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	607 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABE00096.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-amylase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1WSN3 [UniParc]. Last modified May 2, 2006. Version 1. Checksum: DD1CB722C0B3A6BD	FASTA	607	70,867
	10 20 30 40 50 60 MAHILYNAWD SLYKEPFGAV KIDHEVVWRL QVFPDENEEI HYVNLILTKD GEEDVPYALE 70 80 90 100 110 120 NLNHDGLYQV KLQIGTAGLY FYHFEIETSH GRSYLEKRQG GMAQQVSSQS DLLRFQLTCF 130 140 150 160 170 180 DEEVPSPKWY RQGVVYQIFP DRFANGLPNG EVQGRKPNSF IYGTTADKPY YIRDKNNEIV 190 200 210 220 230 240 RWDFYGGNLK GILKKLPYLE ELGVTTIYLN PIFLSRSNHH YDTADFLKID PMIGNEDDLK 250 260 270 280 290 300 ELITEMHKKN MHLILDGVFN HVGKESIYFN ASGSYGKNVG AAQSKESPYY SWFDFIHYPD 310 320 330 340 350 360 DYKSWWGIKD LPVIDKDNPE YQKFIYGDSN RSVLSKWNNF GIDGWRLDVA DELPMNFLRG 370 380 390 400 410 420 IRKNLDSHHK QVMIGEVWED ASNKIAYDER RQYTVGDNLT GVMGYPTRIF VMDLLESVKS 430 440 450 460 470 480 SQDIKKYCNE YLQLQENYPR DFWLNTLNNI GTHDTQRIKT VLHNDDNKVI QAFRILFNLP 490 500 510 520 530 540 GVPCIYYGDE VGVEGDADPD NRRFFPWGQE KNSRIIQEVK QLVDKRKKNI LLQEGRLGFV 550 560 570 580 590 600 IARGSHCPAL AIVRYDDQGN SVYNWLNLTQ YKQIISPENG EYLCLPQNIQ QKFQHELTLD SWEYKVI

References

[1]

"Multireplicon genome architecture of Lactobacillus salivarius." Claesson M.J., Li Y., Leahy S., Canchaya C., van Pijkeren J.P., Cerdeno-Tarraga A.M., Parkhill J., Flynn S., O'Sullivan G.C., Collins J.K., Higgins D., Shanahan F., Fitzgerald G.F., van Sinderen D., O'Toole P.W. Proc. Natl. Acad. Sci. U.S.A. 103:6718-6723(2006) [PubMed: 16617113] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: UCC118.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000233 Genomic DNA. Translation: ABE00096.1.
RefSeq	YP_536179.1. NC_007929.1.
3D structure databases
ProteinModelPortal	Q1WSN3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1WSN3.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3976627.
GenomeReviews	Gene locus LSL_1289 in contig CP000233_GR.
KEGG	lsl:LSL_1289.
PATRIC	22279501. VBILacSal43464_1363.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG304832.
OMA	FNNIGSH.
PhylomeDB	Q1WSN3.
ProtClustDB	CLSK714737.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K01176.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1WSN3_LACS1

Accession

Primary (citable) accession number: Q1WSN3

Entry history

Integrated into UniProtKB/TrEMBL:	May 2, 2006
Last sequence update:	May 2, 2006
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)