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Protein
Submitted name:

Alpha-amylase

Gene

amyA

Organism
Lactobacillus salivarius (strain UCC118)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciLSAL362948:GJDJ-1377-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyAImported
Ordered Locus Names:LSL_1289Imported
OrganismiLactobacillus salivarius (strain UCC118)Imported
Taxonomic identifieri362948 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000006559 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi362948.LSL_1289.

Structurei

3D structure databases

ProteinModelPortaliQ1WSN3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000236083.
KOiK01176.
OMAiESPYYSW.
OrthoDBiEOG6SR926.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1WSN3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHILYNAWD SLYKEPFGAV KIDHEVVWRL QVFPDENEEI HYVNLILTKD
60 70 80 90 100
GEEDVPYALE NLNHDGLYQV KLQIGTAGLY FYHFEIETSH GRSYLEKRQG
110 120 130 140 150
GMAQQVSSQS DLLRFQLTCF DEEVPSPKWY RQGVVYQIFP DRFANGLPNG
160 170 180 190 200
EVQGRKPNSF IYGTTADKPY YIRDKNNEIV RWDFYGGNLK GILKKLPYLE
210 220 230 240 250
ELGVTTIYLN PIFLSRSNHH YDTADFLKID PMIGNEDDLK ELITEMHKKN
260 270 280 290 300
MHLILDGVFN HVGKESIYFN ASGSYGKNVG AAQSKESPYY SWFDFIHYPD
310 320 330 340 350
DYKSWWGIKD LPVIDKDNPE YQKFIYGDSN RSVLSKWNNF GIDGWRLDVA
360 370 380 390 400
DELPMNFLRG IRKNLDSHHK QVMIGEVWED ASNKIAYDER RQYTVGDNLT
410 420 430 440 450
GVMGYPTRIF VMDLLESVKS SQDIKKYCNE YLQLQENYPR DFWLNTLNNI
460 470 480 490 500
GTHDTQRIKT VLHNDDNKVI QAFRILFNLP GVPCIYYGDE VGVEGDADPD
510 520 530 540 550
NRRFFPWGQE KNSRIIQEVK QLVDKRKKNI LLQEGRLGFV IARGSHCPAL
560 570 580 590 600
AIVRYDDQGN SVYNWLNLTQ YKQIISPENG EYLCLPQNIQ QKFQHELTLD

SWEYKVI
Length:607
Mass (Da):70,867
Last modified:May 2, 2006 - v1
Checksum:iDD1CB722C0B3A6BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000233 Genomic DNA. Translation: ABE00096.1.
RefSeqiWP_011476255.1. NC_007929.1.
YP_536179.1. NC_007929.1.

Genome annotation databases

EnsemblBacteriaiABE00096; ABE00096; LSL_1289.
GeneIDi3976627.
KEGGilsl:LSL_1289.
PATRICi22279501. VBILacSal43464_1363.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000233 Genomic DNA. Translation: ABE00096.1.
RefSeqiWP_011476255.1. NC_007929.1.
YP_536179.1. NC_007929.1.

3D structure databases

ProteinModelPortaliQ1WSN3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi362948.LSL_1289.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE00096; ABE00096; LSL_1289.
GeneIDi3976627.
KEGGilsl:LSL_1289.
PATRICi22279501. VBILacSal43464_1363.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000236083.
KOiK01176.
OMAiESPYYSW.
OrthoDBiEOG6SR926.

Enzyme and pathway databases

BioCyciLSAL362948:GJDJ-1377-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UCC118Imported.

Entry informationi

Entry nameiQ1WSN3_LACS1
AccessioniPrimary (citable) accession number: Q1WSN3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 2, 2006
Last sequence update: May 2, 2006
Last modified: May 27, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.