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Q1WSM8

- GLGB_LACS1

UniProt

Q1WSM8 - GLGB_LACS1

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Lactobacillus salivarius (strain UCC118)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei315 – 3151NucleophileUniRule annotation
Active sitei366 – 3661Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciLSAL362948:GJDJ-1382-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:LSL_1294
OrganismiLactobacillus salivarius (strain UCC118)
Taxonomic identifieri362948 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000006559: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6496491,4-alpha-glucan branching enzyme GlgBPRO_0000260663Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi362948.LSL_1294.

Structurei

3D structure databases

ProteinModelPortaliQ1WSM8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiECHQNNI.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1WSM8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVNTEERHG QESLENHKHM FNQGVNYELY NFLGVHKISR DDESGYVFRV
60 70 80 90 100
WAPHAKQVWV CGDFNNWDKS HPMILDEKSG IWSIEVKESR ENQYYKYLVK
110 120 130 140 150
QANGREIMKT DPMAQVYEKR PETAAVVKEL EPFKWNDGLW RGRQKRMNHF
160 170 180 190 200
NNPINIYEVH APSWKEHEDG SLYTFKDLTA ELIPYVKKMG YTHIEFMPLM
210 220 230 240 250
EHPLPASWGY QLTGYFALCS SYGTPDEFKD FVNECHQNNI GVLVDWVPGH
260 270 280 290 300
FSINDDALAY YDGTPTYEYE DPDRAKNIGW GALNFDLGKP EVQSFLLSSA
310 320 330 340 350
FYWLNEFHLD GMRVDAVSNM IYLDYDEGPW KPNKYGDTRN LEGYAFLQKF
360 370 380 390 400
NKVVKFAHPE SLIIAEESSS GTQISGTIES GAIGFDYKWN MGWMNDVLEF
410 420 430 440 450
FEMDPYFRKD NLNLVTFSFM YWQAENFVLP LSHDEVVHGK KSLMHKMWGD
460 470 480 490 500
RYRQFAQLRT LYTFMMMHPG KKLLFMSGEW GQFLEWKFDH GLEWVDLQDE
510 520 530 540 550
MNAKMQHFTS VLNHFYKEER PLWELGQQDA TLEVIDADNH NDTVLSFIRH
560 570 580 590 600
GKRKKDFLIV ILNFTPVERR NFRIGVPYEG TYTEILNTEM KEFGGTWVEH
610 620 630 640
NADSVSEEVN FKDYEHSITT TVPALGAIIL KPKDIKVTRR SSKKHSHKK
Length:649
Mass (Da):76,186
Last modified:May 2, 2006 - v1
Checksum:i3C1AC6475F0C4921
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000233 Genomic DNA. Translation: ABE00101.1.
RefSeqiWP_011476259.1. NC_007929.1.
YP_536184.1. NC_007929.1.

Genome annotation databases

EnsemblBacteriaiABE00101; ABE00101; LSL_1294.
GeneIDi3976546.
KEGGilsl:LSL_1294.
PATRICi22279511. VBILacSal43464_1368.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000233 Genomic DNA. Translation: ABE00101.1 .
RefSeqi WP_011476259.1. NC_007929.1.
YP_536184.1. NC_007929.1.

3D structure databases

ProteinModelPortali Q1WSM8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 362948.LSL_1294.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE00101 ; ABE00101 ; LSL_1294 .
GeneIDi 3976546.
KEGGi lsl:LSL_1294.
PATRICi 22279511. VBILacSal43464_1368.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ECHQNNI.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci LSAL362948:GJDJ-1382-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UCC118.

Entry informationi

Entry nameiGLGB_LACS1
AccessioniPrimary (citable) accession number: Q1WSM8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: May 2, 2006
Last modified: November 26, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3