Q1WRB9 (Q1WRB9_LACS1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-binding protein HU EMBL ABE00579.1

Gene names

Name:	himA EMBL ABE00579.1
Ordered Locus Names:	LSL_1774

Encoded on

Plasmid pMP118 EMBL ABE00579.1

Organism

Lactobacillus salivarius (strain UCC118) [Complete proteome] [HAMAP]

Taxonomic identifier

362948 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	91 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the bacterial histone-like protein family. RuleBase RU003939

Ontologies

Keywords
Ligand	DNA-binding EMBL ABE00579.1
Technical term	Complete proteome Plasmid EMBL ABE00579.1
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1WRB9 [UniParc]. Last modified May 2, 2006. Version 1. Checksum: EBDA9E022A4B4D93	FASTA	91	9,811
	10 20 30 40 50 60 MNKNELVEAI AEKMGATKKE AEAAVSAFTE TVKEALVDGK KVQIIGFGNF EVRERAARKG 70 80 90 RNPQTGKEIE IPASKVPAFK PGKGLKDAVN K

References

[1]

"Multireplicon genome architecture of Lactobacillus salivarius." Claesson M.J., Li Y., Leahy S., Canchaya C., van Pijkeren J.P., Cerdeno-Tarraga A.M., Parkhill J., Flynn S., O'Sullivan G.C., Collins J.K., Higgins D., Shanahan F., Fitzgerald G.F., van Sinderen D., O'Toole P.W. Proc. Natl. Acad. Sci. U.S.A. 103:6718-6723(2006) [PubMed: 16617113] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: UCC118.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000234 Genomic DNA. Translation: ABE00579.1.
RefSeq	YP_536662.1. NC_007930.1.
3D structure databases
ProteinModelPortal	Q1WRB9.
SMR	Q1WRB9. Positions 1-89.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1WRB9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3978289.
GenomeReviews	Gene locus LSL_1774 in contig CP000234_GR.
KEGG	lsl:LSL_1774.
PATRIC	22280606. VBILacSal43464_1890.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0776.
HOGENOM	HBG705085.
OMA	MNSITYE.
PhylomeDB	Q1WRB9.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K03530.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1WRB9_LACS1

Accession

Primary (citable) accession number: Q1WRB9

Entry history

Integrated into UniProtKB/TrEMBL:	May 2, 2006
Last sequence update:	May 2, 2006
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)