Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds together with S18 to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6UniRule annotation
Gene namesi
Name:rpsFUniRule annotation
Ordered Locus Names:RBE_0122
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
Proteomesi
  • UP000001951 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002737351 – 12030S ribosomal protein S6Add BLAST120

Structurei

3D structure databases

ProteinModelPortaliQ1RKB1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000040439.
KOiK02990.
OMAiITEASPM.
OrthoDBiPOG091H015D.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6. 1 hit.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1RKB1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFYESVFIV RQDVSLNDID KIVDDFSKII KDNNGAIVKK EYWGLRALAY
60 70 80 90 100
KIGNHKKGHY YLLGLDTTPA VKQELERKMK LNENIIRFLT QKVDSISNEP
110 120
SPILKNQSTE NTPVIDVTAN
Length:120
Mass (Da):13,744
Last modified:May 16, 2006 - v1
Checksum:iB16482ABBAEF51E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04203.1.
RefSeqiWP_011476818.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE04203; ABE04203; RBE_0122.
KEGGirbe:RBE_0122.
PATRICi17881514. VBIRicBel102610_0141.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04203.1.
RefSeqiWP_011476818.1. NC_007940.1.

3D structure databases

ProteinModelPortaliQ1RKB1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE04203; ABE04203; RBE_0122.
KEGGirbe:RBE_0122.
PATRICi17881514. VBIRicBel102610_0141.

Phylogenomic databases

HOGENOMiHOG000040439.
KOiK02990.
OMAiITEASPM.
OrthoDBiPOG091H015D.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6. 1 hit.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS6_RICBR
AccessioniPrimary (citable) accession number: Q1RKB1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 16, 2006
Last modified: November 2, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.