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Q1RKB1

- RS6_RICBR

UniProt

Q1RKB1 - RS6_RICBR

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Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds together with S18 to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-124-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6UniRule annotation
Gene namesi
Name:rpsFUniRule annotation
Ordered Locus Names:RBE_0122
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
ProteomesiUP000001951: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12012030S ribosomal protein S6PRO_0000273735Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi336407.RBE_0122.

Structurei

3D structure databases

ProteinModelPortaliQ1RKB1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0360.
HOGENOMiHOG000040439.
KOiK02990.
OMAiIRNMIMR.
OrthoDBiEOG6P33DH.

Family and domain databases

Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6.
InterProiIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamiPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1RKB1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSFYESVFIV RQDVSLNDID KIVDDFSKII KDNNGAIVKK EYWGLRALAY
60 70 80 90 100
KIGNHKKGHY YLLGLDTTPA VKQELERKMK LNENIIRFLT QKVDSISNEP
110 120
SPILKNQSTE NTPVIDVTAN
Length:120
Mass (Da):13,744
Last modified:May 16, 2006 - v1
Checksum:iB16482ABBAEF51E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04203.1.
RefSeqiYP_537292.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE04203; ABE04203; RBE_0122.
GeneIDi3995318.
KEGGirbe:RBE_0122.
PATRICi17881514. VBIRicBel102610_0141.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04203.1 .
RefSeqi YP_537292.1. NC_007940.1.

3D structure databases

ProteinModelPortali Q1RKB1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 336407.RBE_0122.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE04203 ; ABE04203 ; RBE_0122 .
GeneIDi 3995318.
KEGGi rbe:RBE_0122.
PATRICi 17881514. VBIRicBel102610_0141.

Phylogenomic databases

eggNOGi COG0360.
HOGENOMi HOG000040439.
KOi K02990.
OMAi IRNMIMR.
OrthoDBi EOG6P33DH.

Enzyme and pathway databases

BioCyci RBEL336407:GJCY-124-MONOMER.

Family and domain databases

Gene3Di 3.30.70.60. 1 hit.
HAMAPi MF_00360. Ribosomal_S6.
InterProi IPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view ]
Pfami PF01250. Ribosomal_S6. 1 hit.
[Graphical view ]
SUPFAMi SSF54995. SSF54995. 1 hit.
TIGRFAMsi TIGR00166. S6. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
    Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
    PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RML369-C.

Entry informationi

Entry nameiRS6_RICBR
AccessioniPrimary (citable) accession number: Q1RKB1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 16, 2006
Last modified: October 1, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3