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Q1RKB1 (RS6_RICBR) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S6
Gene names
Name:rpsF
Ordered Locus Names:RBE_0122
OrganismRickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP]
Taxonomic identifier336407 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group

Protein attributes

Sequence length120 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00360

Sequence similarities

Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12012030S ribosomal protein S6 HAMAP-Rule MF_00360
PRO_0000273735

Sequences

Sequence LengthMass (Da)Tools
Q1RKB1 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: B16482ABBAEF51E9

FASTA12013,744
        10         20         30         40         50         60 
MSFYESVFIV RQDVSLNDID KIVDDFSKII KDNNGAIVKK EYWGLRALAY KIGNHKKGHY 

        70         80         90        100        110        120 
YLLGLDTTPA VKQELERKMK LNENIIRFLT QKVDSISNEP SPILKNQSTE NTPVIDVTAN 

« Hide

References

[1]"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RML369-C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000087 Genomic DNA. Translation: ABE04203.1.
RefSeqYP_537292.1. NC_007940.1.

3D structure databases

ProteinModelPortalQ1RKB1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING336407.RBE_0122.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE04203; ABE04203; RBE_0122.
GeneID3995318.
KEGGrbe:RBE_0122.
PATRIC17881514. VBIRicBel102610_0141.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0360.
HOGENOMHOG000040439.
KOK02990.
OMAIRNMIMR.
OrthoDBEOG6P33DH.

Enzyme and pathway databases

BioCycRBEL336407:GJCY-124-MONOMER.

Family and domain databases

Gene3D3.30.70.60. 1 hit.
HAMAPMF_00360. Ribosomal_S6.
InterProIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMSSF54995. SSF54995. 1 hit.
TIGRFAMsTIGR00166. S6. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS6_RICBR
AccessionPrimary (citable) accession number: Q1RKB1
Entry history
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia bellii strain RML369-C

Rickettsia bellii (strain RML369-C): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries