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Q1RKB1

- RS6_RICBR

UniProt

Q1RKB1 - RS6_RICBR

Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds together with S18 to 16S ribosomal RNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciRBEL336407:GJCY-124-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S6UniRule annotation
    Gene namesi
    Name:rpsFUniRule annotation
    Ordered Locus Names:RBE_0122
    OrganismiRickettsia bellii (strain RML369-C)
    Taxonomic identifieri336407 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
    ProteomesiUP000001951: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12012030S ribosomal protein S6PRO_0000273735Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi336407.RBE_0122.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1RKB1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S6P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0360.
    HOGENOMiHOG000040439.
    KOiK02990.
    OMAiIRNMIMR.
    OrthoDBiEOG6P33DH.

    Family and domain databases

    Gene3Di3.30.70.60. 1 hit.
    HAMAPiMF_00360. Ribosomal_S6.
    InterProiIPR000529. Ribosomal_S6.
    IPR020814. Ribosomal_S6_plastid/chlpt.
    IPR014717. Transl_elong_EF1B/ribosomal_S6.
    [Graphical view]
    PfamiPF01250. Ribosomal_S6. 1 hit.
    [Graphical view]
    SUPFAMiSSF54995. SSF54995. 1 hit.
    TIGRFAMsiTIGR00166. S6. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1RKB1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSFYESVFIV RQDVSLNDID KIVDDFSKII KDNNGAIVKK EYWGLRALAY    50
    KIGNHKKGHY YLLGLDTTPA VKQELERKMK LNENIIRFLT QKVDSISNEP 100
    SPILKNQSTE NTPVIDVTAN 120
    Length:120
    Mass (Da):13,744
    Last modified:May 16, 2006 - v1
    Checksum:iB16482ABBAEF51E9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE04203.1.
    RefSeqiYP_537292.1. NC_007940.1.

    Genome annotation databases

    EnsemblBacteriaiABE04203; ABE04203; RBE_0122.
    GeneIDi3995318.
    KEGGirbe:RBE_0122.
    PATRICi17881514. VBIRicBel102610_0141.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE04203.1 .
    RefSeqi YP_537292.1. NC_007940.1.

    3D structure databases

    ProteinModelPortali Q1RKB1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 336407.RBE_0122.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE04203 ; ABE04203 ; RBE_0122 .
    GeneIDi 3995318.
    KEGGi rbe:RBE_0122.
    PATRICi 17881514. VBIRicBel102610_0141.

    Phylogenomic databases

    eggNOGi COG0360.
    HOGENOMi HOG000040439.
    KOi K02990.
    OMAi IRNMIMR.
    OrthoDBi EOG6P33DH.

    Enzyme and pathway databases

    BioCyci RBEL336407:GJCY-124-MONOMER.

    Family and domain databases

    Gene3Di 3.30.70.60. 1 hit.
    HAMAPi MF_00360. Ribosomal_S6.
    InterProi IPR000529. Ribosomal_S6.
    IPR020814. Ribosomal_S6_plastid/chlpt.
    IPR014717. Transl_elong_EF1B/ribosomal_S6.
    [Graphical view ]
    Pfami PF01250. Ribosomal_S6. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54995. SSF54995. 1 hit.
    TIGRFAMsi TIGR00166. S6. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
      Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
      PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RML369-C.

    Entry informationi

    Entry nameiRS6_RICBR
    AccessioniPrimary (citable) accession number: Q1RKB1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 23, 2007
    Last sequence update: May 16, 2006
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia bellii strain RML369-C
      Rickettsia bellii (strain RML369-C): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3