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Q1RK34

- LOLD_RICBR

UniProt

Q1RK34 - LOLD_RICBR

Protein

Lipoprotein-releasing system ATP-binding protein LolD

Gene

lolD

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (16 May 2006)
      Previous versions | rss
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    Functioni

    Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi42 – 498ATPUniRule annotation

    GO - Molecular functioni

    1. ATPase activity Source: InterPro
    2. ATP binding Source: UniProtKB-HAMAP
    3. lipoprotein transporter activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Transport

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciRBEL336407:GJCY-204-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Lipoprotein-releasing system ATP-binding protein LolDUniRule annotation (EC:3.6.3.-UniRule annotation)
    Gene namesi
    Name:lolDUniRule annotation
    Ordered Locus Names:RBE_0199
    OrganismiRickettsia bellii (strain RML369-C)
    Taxonomic identifieri336407 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
    ProteomesiUP000001951: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

    GO - Cellular componenti

    1. ATP-binding cassette (ABC) transporter complex Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 221221Lipoprotein-releasing system ATP-binding protein LolDPRO_0000260196Add
    BLAST

    Interactioni

    Subunit structurei

    The complex is composed of two ATP-binding proteins (LolD) and two transmembrane proteins (LolC and LolE).UniRule annotation

    Protein-protein interaction databases

    STRINGi336407.RBE_0199.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1RK34.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini6 – 220215ABC transporterUniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. [View classification]UniRule annotation
    Contains 1 ABC transporter domain.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1136.
    KOiK09810.
    OMAiDGKMEDT.
    OrthoDBiEOG6T7N3V.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR017871. ABC_transporter_CS.
    IPR015854. ABC_transpr_LolD.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00005. ABC_tran. 1 hit.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
    PS50893. ABC_TRANSPORTER_2. 1 hit.
    PS51244. LOLD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1RK34-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSNKILTLKN VSKHYRQGNS IIRVLDDLNL NINEGELIAI IGSSGSGKST    50
    LLHIAGLLDK PTNGEVIIAN NEYKTNHLIR LNYLGFIYQQ HHLLKDFTAI 100
    ENVIMPRLIN GSNQKEAIEA AKSILDSLGL GKKLHNMPGE LSGGEQQRVA 150
    IARSLINKPK IILADEPTGN LDPKTTNEVF NLFLKVAKEQ NTAIVMVTHN 200
    HELAHRMDKL YKLKHGALNM S 221
    Length:221
    Mass (Da):24,526
    Last modified:May 16, 2006 - v1
    Checksum:i9A42322966D37002
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE04280.1.
    RefSeqiYP_537369.1. NC_007940.1.

    Genome annotation databases

    EnsemblBacteriaiABE04280; ABE04280; RBE_0199.
    GeneIDi3995343.
    KEGGirbe:RBE_0199.
    PATRICi17881695. VBIRicBel102610_0228.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE04280.1 .
    RefSeqi YP_537369.1. NC_007940.1.

    3D structure databases

    ProteinModelPortali Q1RK34.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 336407.RBE_0199.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE04280 ; ABE04280 ; RBE_0199 .
    GeneIDi 3995343.
    KEGGi rbe:RBE_0199.
    PATRICi 17881695. VBIRicBel102610_0228.

    Phylogenomic databases

    eggNOGi COG1136.
    KOi K09810.
    OMAi DGKMEDT.
    OrthoDBi EOG6T7N3V.

    Enzyme and pathway databases

    BioCyci RBEL336407:GJCY-204-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR017871. ABC_transporter_CS.
    IPR015854. ABC_transpr_LolD.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00005. ABC_tran. 1 hit.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    PROSITEi PS00211. ABC_TRANSPORTER_1. 1 hit.
    PS50893. ABC_TRANSPORTER_2. 1 hit.
    PS51244. LOLD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
      Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
      PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RML369-C.

    Entry informationi

    Entry nameiLOLD_RICBR
    AccessioniPrimary (citable) accession number: Q1RK34
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 28, 2006
    Last sequence update: May 16, 2006
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia bellii strain RML369-C
      Rickettsia bellii (strain RML369-C): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3