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Q1RK34 (LOLD_RICBR) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Lipoprotein-releasing system ATP-binding protein LolD

EC=3.6.3.-
Gene names
Name:lolD
Ordered Locus Names:RBE_0199
OrganismRickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP]
Taxonomic identifier336407 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group

Protein attributes

Sequence length221 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner By similarity.

Subunit structure

The complex is composed of two ATP-binding proteins (LolD) and two transmembrane proteins (LolC and LolE) By similarity.

Subcellular location

Cell inner membrane; Peripheral membrane protein By similarity.

Sequence similarities

Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. [View classification]

Contains 1 ABC transporter domain.

Ontologies

Keywords
   Biological processTransport
   Cellular componentCell inner membrane
Cell membrane
Membrane
   LigandATP-binding
Nucleotide-binding
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentATP-binding cassette (ABC) transporter complex

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

ATPase activity

Inferred from electronic annotation. Source: InterPro

lipoprotein transporter activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 221221Lipoprotein-releasing system ATP-binding protein LolD
PRO_0000260196

Regions

Domain6 – 220215ABC transporter
Nucleotide binding42 – 498ATP Potential

Sequences

Sequence LengthMass (Da)Tools
Q1RK34 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 9A42322966D37002

FASTA22124,526
        10         20         30         40         50         60 
MSNKILTLKN VSKHYRQGNS IIRVLDDLNL NINEGELIAI IGSSGSGKST LLHIAGLLDK 

        70         80         90        100        110        120 
PTNGEVIIAN NEYKTNHLIR LNYLGFIYQQ HHLLKDFTAI ENVIMPRLIN GSNQKEAIEA 

       130        140        150        160        170        180 
AKSILDSLGL GKKLHNMPGE LSGGEQQRVA IARSLINKPK IILADEPTGN LDPKTTNEVF 

       190        200        210        220 
NLFLKVAKEQ NTAIVMVTHN HELAHRMDKL YKLKHGALNM S 

« Hide

References

[1]"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RML369-C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000087 Genomic DNA. Translation: ABE04280.1.
RefSeqYP_537369.1. NC_007940.1.

3D structure databases

ProteinModelPortalQ1RK34.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING336407.RBE_0199.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE04280; ABE04280; RBE_0199.
GeneID3995343.
KEGGrbe:RBE_0199.
PATRIC17881695. VBIRicBel102610_0228.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1136.
KOK09810.
OMADGKMEDT.
OrthoDBEOG6T7N3V.

Enzyme and pathway databases

BioCycRBEL336407:GJCY-204-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR015854. ABC_transpr_LolD.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS51244. LOLD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameLOLD_RICBR
AccessionPrimary (citable) accession number: Q1RK34
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: May 16, 2006
Last modified: July 9, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia bellii strain RML369-C

Rickettsia bellii (strain RML369-C): entries and gene names