Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q1RJT5

- RF1_RICBR

UniProt

Q1RJT5 - RF1_RICBR

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Peptide chain release factor 1

Gene

prfA

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.UniRule annotation

GO - Molecular functioni

  1. translation release factor activity, codon specific Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-304-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Peptide chain release factor 1UniRule annotation
Short name:
RF-1UniRule annotation
Gene namesi
Name:prfAUniRule annotation
Ordered Locus Names:RBE_0298
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
ProteomesiUP000001951: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 357357Peptide chain release factor 1PRO_0000263339Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei236 – 2361N5-methylglutamineUniRule annotation

Post-translational modificationi

Methylated by PrmC. Methylation increases the termination efficiency of RF1.UniRule annotation

Keywords - PTMi

Methylation

Interactioni

Protein-protein interaction databases

STRINGi336407.RBE_0298.

Structurei

3D structure databases

ProteinModelPortaliQ1RJT5.
SMRiQ1RJT5. Positions 104-355.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the prokaryotic/mitochondrial release factor family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0216.
HOGENOMiHOG000074815.
KOiK02835.
OMAiYGQLKFE.
OrthoDBiEOG6TN48J.

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
HAMAPiMF_00093. Rel_fac_1.
InterProiIPR014720. dsRNA-bd_dom.
IPR005139. PCRF.
IPR000352. Pep_chain_release_fac_I_II.
IPR004373. PrfA.
[Graphical view]
PfamiPF03462. PCRF. 1 hit.
PF00472. RF-1. 1 hit.
[Graphical view]
SMARTiSM00937. PCRF. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00019. prfA. 1 hit.
PROSITEiPS00745. RF_PROK_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1RJT5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNISSFSDNL TKILGKYEDL SEKLSSGIGG EEFVKASKEY ADLEDIVQKI
60 70 80 90 100
KEYNKAKAEL EEANNFKQEP SLDKATLEMI EEEIRNLEDS LPTLERSVKI
110 120 130 140 150
ALLPKDEADS KSAIIEIRAG TGGEEAALFA AKLFNMYQRY AELKGWRFEI
160 170 180 190 200
LSIDETGIGG YKEVSASIKG KDVFSKLKFE SGVHRVQRVP ETESQGRIHT
210 220 230 240 250
SAATVAVLPE VEDVDIKLEE KDLRIDTYRA SGAGGQHVNT TDSAVRITHI
260 270 280 290 300
PTGITVALQD EKSQHKNKAK ALKILRARIY EEERRKKDQE RANNRRKQIG
310 320 330 340 350
SGDRSERIRT YNFPQGRVSD HRINLTLYKI DEVINGQLDE FIEALIANDE

AKKLSDI
Length:357
Mass (Da):40,217
Last modified:May 16, 2006 - v1
Checksum:i530AAD165D1027C8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000087 Genomic DNA. Translation: ABE04379.1.
RefSeqiYP_537468.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE04379; ABE04379; RBE_0298.
GeneIDi3996208.
KEGGirbe:RBE_0298.
PATRICi17881911. VBIRicBel102610_0335.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000087 Genomic DNA. Translation: ABE04379.1 .
RefSeqi YP_537468.1. NC_007940.1.

3D structure databases

ProteinModelPortali Q1RJT5.
SMRi Q1RJT5. Positions 104-355.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 336407.RBE_0298.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE04379 ; ABE04379 ; RBE_0298 .
GeneIDi 3996208.
KEGGi rbe:RBE_0298.
PATRICi 17881911. VBIRicBel102610_0335.

Phylogenomic databases

eggNOGi COG0216.
HOGENOMi HOG000074815.
KOi K02835.
OMAi YGQLKFE.
OrthoDBi EOG6TN48J.

Enzyme and pathway databases

BioCyci RBEL336407:GJCY-304-MONOMER.

Family and domain databases

Gene3Di 3.30.160.20. 1 hit.
HAMAPi MF_00093. Rel_fac_1.
InterProi IPR014720. dsRNA-bd_dom.
IPR005139. PCRF.
IPR000352. Pep_chain_release_fac_I_II.
IPR004373. PrfA.
[Graphical view ]
Pfami PF03462. PCRF. 1 hit.
PF00472. RF-1. 1 hit.
[Graphical view ]
SMARTi SM00937. PCRF. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00019. prfA. 1 hit.
PROSITEi PS00745. RF_PROK_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
    Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
    PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RML369-C.

Entry informationi

Entry nameiRF1_RICBR
AccessioniPrimary (citable) accession number: Q1RJT5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: May 16, 2006
Last modified: October 29, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3